FFCP PHASE1:Hg19::chr2:217524323..217524339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3485 | |EntrezGene=3485 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5471 | |HGNC=5471 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMY1 | |UniProt=C9JMY1 | ||
|association_with_transcript=-1bp_to_ENST00000456764_5end | |association_with_transcript=-1bp_to_ENST00000456764_5end | ||
|cluster_id=chr2:217524323..217524339,+ | |||
|description=CAGE_peak_11_at_IGFBP2_5end | |description=CAGE_peak_11_at_IGFBP2_5end | ||
|id=chr2:217524323..217524339,+ | |id=chr2:217524323..217524339,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.60e-17!43;CL:0000223!7.79e-12!59;CL:0002251!3.95e-11!21;CL:0002327!8.76e-10!4;CL:0002368!1.83e-07!13 | |ontology_enrichment_celltype=CL:0002076!1.60e-17!43;CL:0000223!7.79e-12!59;CL:0002251!3.95e-11!21;CL:0002327!8.76e-10!4;CL:0002368!1.83e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000575;7.05e-18;2!CL:0000307;2.89e-12;3!CL:0002251;1.35e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,6.48e-18,2;CL:0000068,2.59e-12,3;CL:0000069,2.59e-12,3;CL:0000307,2.59e-12,3;CL:0000377,2.59e-12,3;CL:0002076,8.32e-08,42;CL:0002251,1.38e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:1749!4.87e-10!14 | |ontology_enrichment_disease=DOID:1749!4.87e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;7.05e-34;1!DOID:3149;7.05e-34;1!DOID:3451;1.07e-17;2!DOID:4159;1.07e-17;2!DOID:0060122;1.07e-17;2!DOID:1749;1.94e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.85e-34,1;DOID:3149,9.85e-34,1;DOID:3451,1.27e-17,2;DOID:4159,1.27e-17,2;DOID:0060122,1.27e-17,2;DOID:1749,1.99e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000974!3.04e-19!10;UBERON:0001004!8.57e-14!72;UBERON:0003729!3.05e-13!5;UBERON:0003343!5.09e-10!4;UBERON:0004785!5.09e-10!4;UBERON:0003126!8.28e-10!7;UBERON:0001005!8.28e-10!7;UBERON:0001911!8.76e-10!4;UBERON:0005333!8.76e-10!4;UBERON:0008425!8.76e-10!4;UBERON:0005311!8.76e-10!4;UBERON:0003127!9.30e-10!2;UBERON:0000341!1.67e-09!2;UBERON:0000161!1.90e-09!35;UBERON:0000166!1.52e-08!21;UBERON:0000065!2.29e-08!53;UBERON:0000344!4.32e-08!12;UBERON:0000165!6.65e-08!28;UBERON:0000930!6.65e-08!28;UBERON:0000153!2.58e-07!129;UBERON:0007811!2.58e-07!129;UBERON:0004119!6.02e-07!169;UBERON:0000925!6.02e-07!169;UBERON:0006595!6.02e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;9.09e-34;4!UBERON:0004785;9.09e-34;4!UBERON:0000974;6.41e-23;6!UBERON:0003126;7.13e-20;7!UBERON:0001005;7.13e-20;7!UBERON:0003127;5.48e-18;2!UBERON:0003729;3.65e-11;13!UBERON:0007196;7.75e-10;15!UBERON:0001558;7.75e-10;15!UBERON:0000964;1.27e-09;4!UBERON:0010409;1.27e-09;4!UBERON:0000014;1.57e-09;4!UBERON:0000161;6.04e-08;19!UBERON:0000166;6.04e-08;19!UBERON:0000344;1.35e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,9.88e-34,4;UBERON:0004785,9.88e-34,4;UBERON:0003126,6.48e-20,7;UBERON:0001005,6.48e-20,7;UBERON:0003127,5.48e-18,2;UBERON:0000974,3.47e-14,10;UBERON:0003729,3.75e-11,13;UBERON:0007196,7.41e-10,15;UBERON:0001558,7.41e-10,15;UBERON:0000964,1.22e-09,4;UBERON:0010409,1.22e-09,4;UBERON:0004348,1.22e-09,4;UBERON:0005427,1.22e-09,4;UBERON:0000014,1.70e-09,4;UBERON:0001004,1.05e-07,74;UBERON:0000344,1.38e-07,20;UBERON:0000166,5.57e-07,22;UBERON:0001444,8.40e-07,49 | |||
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| ||
|short_description=p11@IGFBP2 | |short_description=p11@IGFBP2 | ||
}} | }} |
Latest revision as of 06:32, 20 September 2015
Short description: | p11@IGFBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_IGFBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000456764_5end |
EntrezGene: | IGFBP2 |
HGNC: | 5471 |
UniProt: | C9JMY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 6.48e-18 | 2 |
duct epithelial cell | 2.59e-12 | 3 |
branched duct epithelial cell | 2.59e-12 | 3 |
tracheal epithelial cell | 2.59e-12 | 3 |
tracheoblast | 2.59e-12 | 3 |
endo-epithelial cell | 8.32e-08 | 42 |
epithelial cell of alimentary canal | 1.38e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 9.88e-34 | 4 |
respiratory system mucosa | 9.88e-34 | 4 |
trachea | 6.48e-20 | 7 |
respiratory airway | 6.48e-20 | 7 |
open tracheal system trachea | 5.48e-18 | 2 |
neck | 3.47e-14 | 10 |
mouth mucosa | 3.75e-11 | 13 |
tracheobronchial tree | 7.41e-10 | 15 |
lower respiratory tract | 7.41e-10 | 15 |
cornea | 1.22e-09 | 4 |
eye surface | 1.22e-09 | 4 |
optic eminence | 1.22e-09 | 4 |
corneal primordium | 1.22e-09 | 4 |
zone of skin | 1.70e-09 | 4 |
respiratory system | 1.05e-07 | 74 |
mucosa | 1.38e-07 | 20 |
oral opening | 5.57e-07 | 22 |
subdivision of head | 8.40e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.85e-34 | 1 |
keratoacanthoma | 9.85e-34 | 1 |
skin carcinoma | 1.27e-17 | 2 |
skin cancer | 1.27e-17 | 2 |
integumentary system cancer | 1.27e-17 | 2 |
squamous cell carcinoma | 1.99e-10 | 14 |