FFCP PHASE1:Hg19::chr2:220103472..220103480,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:220103472..220103480,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr2:220103472..220103480,- | |description=CAGE_peak_at_chr2:220103472..220103480,- | ||
|id=chr2:220103472..220103480,- | |id=chr2:220103472..220103480,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;9.45e-18;3!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;9.45e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.81e-11;19!UBERON:0006925;1.81e-11;19!UBERON:0002423;5.71e-09;25!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7!UBERON:0002368;1.21e-07;33!UBERON:0000473;1.49e-07;8!UBERON:0002365;3.69e-07;31!UBERON:0002330;3.69e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-11,19;UBERON:0006925,1.72e-11,19;UBERON:0008836,1.72e-11,19;UBERON:0008835,4.53e-10,22;UBERON:0003894,4.53e-10,22;UBERON:0009854,1.12e-09,23;UBERON:0007499,5.49e-09,25;UBERON:0009497,5.49e-09,25;UBERON:0000015,5.49e-09,25;UBERON:0002423,5.49e-09,25;UBERON:0006235,5.49e-09,25;UBERON:0004161,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7;UBERON:0000473,1.49e-07,8;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31 | |||
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| ||
|short_description=p@chr2:220103472..220103480,- | |short_description=p@chr2:220103472..220103480,- | ||
}} | }} |
Latest revision as of 06:49, 29 July 2015
Short description: | p@chr2:220103472..220103480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220103472..220103480, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-11 | 19 |
digestive gland | 1.72e-11 | 19 |
liver bud | 1.72e-11 | 19 |
hepatic diverticulum | 4.53e-10 | 22 |
liver primordium | 4.53e-10 | 22 |
digestive tract diverticulum | 1.12e-09 | 23 |
epithelial sac | 5.49e-09 | 25 |
epithelium of foregut-midgut junction | 5.49e-09 | 25 |
anatomical boundary | 5.49e-09 | 25 |
hepatobiliary system | 5.49e-09 | 25 |
foregut-midgut junction | 5.49e-09 | 25 |
septum transversum | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
testis | 1.49e-07 | 8 |
exocrine gland | 1.92e-07 | 31 |
exocrine system | 1.92e-07 | 31 |