FFCP PHASE1:Hg19::chr2:45236648..45236659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10736 | |EntrezGene=10736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10888 | |HGNC=10888 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPC8 | |UniProt=Q9NPC8 | ||
|association_with_transcript=-79bp_to_ENST00000303077_5end | |association_with_transcript=-79bp_to_ENST00000303077_5end | ||
|cluster_id=chr2:45236648..45236659,- | |||
|description=CAGE_peak_5_at_SIX2_5end | |description=CAGE_peak_5_at_SIX2_5end | ||
|id=chr2:45236648..45236659,- | |id=chr2:45236648..45236659,- | ||
|ontology_enrichment_celltype=CL:0000499!5.00e-11!27;CL:0000327!7.81e-11!14;CL:0000153!5.79e-09!9;CL:0000447!5.79e-09!9;CL:0002556!2.09e-07!6;CL:0000630!4.51e-07!9 | |ontology_enrichment_celltype=CL:0000499!5.00e-11!27;CL:0000327!7.81e-11!14;CL:0000153!5.79e-09!9;CL:0000447!5.79e-09!9;CL:0002556!2.09e-07!6;CL:0000630!4.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002575;5.42e-19;2!CL:0000669;5.70e-10;4!CL:0002552;2.36e-08;5!CL:0002569;3.13e-07;6!CL:0000138;4.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.53e-19,2;CL:0000669,5.21e-10,4;CL:0002552,1.83e-08,5;CL:0002569,3.14e-07,6;CL:0000058,4.00e-07,6;CL:0000138,4.00e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.28e-10;1!UBERON:0008425;2.28e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.14e-07!28;UBERON:0000930!1.14e-07!28;UBERON:0001758!2.09e-07!6;UBERON:0003672!2.09e-07!6;UBERON:0000075!4.30e-07!13;UBERON:0005944!4.30e-07!13;UBERON:0004288!4.30e-07!13;UBERON:0003089!4.30e-07!13;UBERON:0003129!9.52e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.28e-10;1!UBERON:0003422;3.13e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,3.61e-10,1;UBERON:0007645,3.61e-10,1;UBERON:0007647,3.61e-10,1;UBERON:0010115,3.61e-10,1;UBERON:0003422,3.14e-07,6 | |||
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| ||
|short_description=p5@SIX2 | |short_description=p5@SIX2 | ||
}} | }} |
Latest revision as of 09:54, 17 September 2015
Short description: | p5@SIX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000303077_5end |
EntrezGene: | SIX2 |
HGNC: | 10888 |
UniProt: | Q9NPC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.53e-19 | 2 |
pericyte cell | 5.21e-10 | 4 |
fibroblast of gingiva | 1.83e-08 | 5 |
mesenchymal stem cell of umbilical cord | 3.14e-07 | 6 |
chondroblast | 4.00e-07 | 6 |
chondrocyte | 4.00e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dura mater | 3.61e-10 | 1 |
future meninx | 3.61e-10 | 1 |
ectomeninx | 3.61e-10 | 1 |
future dura mater | 3.61e-10 | 1 |
mesenchyme of umbilical cord | 3.14e-07 | 6 |