FFCP PHASE1:Hg19::chr9:22238234..22238247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:22238234..22238247,+ | |||
|description=CAGE_peak_at_chr9:22238234..22238247,+ | |description=CAGE_peak_at_chr9:22238234..22238247,+ | ||
|id=chr9:22238234..22238247,+ | |id=chr9:22238234..22238247,+ | ||
|ontology_enrichment_celltype=CL:0000064!2.11e-07!3;CL:0005012!2.11e-07!3;CL:0000067!2.11e-07!3;CL:0002304!2.11e-07!3;CL:0002580!5.31e-07!3 | |ontology_enrichment_celltype=CL:0000064!2.11e-07!3;CL:0005012!2.11e-07!3;CL:0000067!2.11e-07!3;CL:0002304!2.11e-07!3;CL:0002580!5.31e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.05e-41;3!CL:0000067;5.05e-41;3!CL:0005012;5.05e-41;3!CL:0002304;5.05e-41;3!CL:0002568;4.72e-15;1!CL:0000222;7.63e-15;1!CL:0002616;1.84e-14;1!CL:0002569;6.79e-10;6!CL:0000075;2.82e-08;27!CL:0000349;7.05e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.42e-41,3;CL:0000067,4.42e-41,3;CL:0005012,4.42e-41,3;CL:0002304,4.42e-41,3;CL:0002568,4.73e-15,1;CL:0002616,1.07e-14,1;CL:0002569,7.42e-10,6;CL:0000075,2.85e-08,27;CL:0000349,7.34e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!1.47e-08!4;UBERON:0007625!5.21e-08!11;UBERON:0003688!1.55e-07!6;UBERON:0002358!1.55e-07!6;UBERON:0003684!1.55e-07!6;UBERON:0001178!1.55e-07!6;UBERON:0001778!2.11e-07!3;UBERON:0001775!2.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.05e-41;3!UBERON:0001775;5.05e-41;3!UBERON:0000488;5.70e-31;4!UBERON:0007625;2.02e-30;11!UBERON:0002203;6.80e-21;6!UBERON:0001768;6.80e-21;6!UBERON:0002200;6.80e-21;6!UBERON:0000019;1.19e-17;19!UBERON:0000047;1.19e-17;19!UBERON:0004088;1.19e-17;19!UBERON:0010230;1.19e-17;19!UBERON:0000970;9.06e-17;20!UBERON:0002104;5.68e-16;21!UBERON:0001456;5.68e-16;21!UBERON:0001801;9.87e-16;14!UBERON:0000020;1.39e-14;23!UBERON:0001032;5.62e-14;24!UBERON:0004456;5.62e-14;24!UBERON:0006876;1.10e-11;11!UBERON:0010371;8.46e-11;31!UBERON:0003422;6.79e-10;6!UBERON:0003104;1.32e-08;7!UBERON:0009142;1.32e-08;7!UBERON:0005406;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.42e-41,3;UBERON:0001775,4.42e-41,3;UBERON:0000488,5.16e-31,4;UBERON:0007625,1.74e-30,11;UBERON:0002203,6.37e-21,6;UBERON:0001768,6.37e-21,6;UBERON:0002200,6.37e-21,6;UBERON:0000019,8.35e-17,20;UBERON:0000047,8.35e-17,20;UBERON:0010312,8.35e-17,20;UBERON:0004088,8.35e-17,20;UBERON:0010230,8.35e-17,20;UBERON:0003072,8.35e-17,20;UBERON:0004128,8.35e-17,20;UBERON:0003071,8.35e-17,20;UBERON:0000970,5.26e-16,21;UBERON:0002104,5.26e-16,21;UBERON:0001801,1.01e-15,14;UBERON:0001456,2.80e-15,22;UBERON:0000020,5.25e-14,24;UBERON:0001032,5.25e-14,24;UBERON:0004456,5.25e-14,24;UBERON:0006876,1.06e-11,11;UBERON:0005085,7.74e-11,31;UBERON:0003422,7.42e-10,6;UBERON:0005406,5.37e-08,2;UBERON:0001444,7.98e-07,49 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0.795285947051099,0,2.17430079477356,3.54767035940102,2.63504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0.98667019366864,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,2.11335649624479,0,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,4.13669490424889,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.53461973288062,0.841980283299221,0.512556597022804,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64007322849853,0,0,0.640986253728404,0.330037999682352,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0.685209623233754,0,0,0.782205530939212,0.320635281006135,0,0,0,0,0,0.14405479798815,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,0.383830394638891,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0.941063278792687,0,0,0,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0,0.159296767163702,0,0.465788870628778,0,0.53168342911599,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0.336749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.762764190934334,0.690359926060101,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882655033580851,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0.795285947051099,0,2.17430079477356,3.54767035940102,2.63504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,0.286836620748814,0,0.560677600142307,1.06748995729705,0.98667019366864,0,0,0,0.756787138224657,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,2.11335649624479,0,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,4.13669490424889,0,0,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.53461973288062,0.841980283299221,0.512556597022804,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64007322849853,0,0,0.640986253728404,0.330037999682352,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0.685209623233754,0,0,0.782205530939212,0.320635281006135,0,0,0,0,0,0.14405479798815,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.78741985211799,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,0.383830394638891,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0.151649117541648,0,0.941063278792687,0,0,0,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0,0.159296767163702,0,0.465788870628778,0,0.53168342911599,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0.336749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.762764190934334,0.690359926060101,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882655033580851,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr9:22238234..22238247,+ | |short_description=p@chr9:22238234..22238247,+ | ||
}} | }} |
Latest revision as of 01:11, 1 August 2015
Short description: | p@chr9:22238234..22238247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:22238234..22238247, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.42e-41 | 3 |
ciliated epithelial cell | 4.42e-41 | 3 |
multi-ciliated epithelial cell | 4.42e-41 | 3 |
non-pigmented ciliary epithelial cell | 4.42e-41 | 3 |
mesenchymal stem cell of Wharton's jelly | 4.73e-15 | 1 |
perirenal adipocyte cell | 1.07e-14 | 1 |
mesenchymal stem cell of umbilical cord | 7.42e-10 | 6 |
columnar/cuboidal epithelial cell | 2.85e-08 | 27 |
extraembryonic cell | 7.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.42e-41 | 3 |
ciliary body | 4.42e-41 | 3 |
atypical epithelium | 5.16e-31 | 4 |
pigment epithelium of eye | 1.74e-30 | 11 |
vasculature of eye | 6.37e-21 | 6 |
uvea | 6.37e-21 | 6 |
vasculature of head | 6.37e-21 | 6 |
camera-type eye | 8.35e-17 | 20 |
simple eye | 8.35e-17 | 20 |
immature eye | 8.35e-17 | 20 |
ocular region | 8.35e-17 | 20 |
eyeball of camera-type eye | 8.35e-17 | 20 |
optic cup | 8.35e-17 | 20 |
optic vesicle | 8.35e-17 | 20 |
eye primordium | 8.35e-17 | 20 |
eye | 5.26e-16 | 21 |
visual system | 5.26e-16 | 21 |
anterior segment of eyeball | 1.01e-15 | 14 |
face | 2.80e-15 | 22 |
sense organ | 5.25e-14 | 24 |
sensory system | 5.25e-14 | 24 |
entire sense organ system | 5.25e-14 | 24 |
vasculature of organ | 1.06e-11 | 11 |
ectodermal placode | 7.74e-11 | 31 |
mesenchyme of umbilical cord | 7.42e-10 | 6 |
perirenal fat | 5.37e-08 | 2 |
subdivision of head | 7.98e-07 | 49 |