FFCP PHASE1:Hg19::chrX:119693827..119693835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=A6NE76 | |UniProt=A6NE76 | ||
|association_with_transcript=-29bp_to_ENST00000371323_5end | |association_with_transcript=-29bp_to_ENST00000371323_5end | ||
|cluster_id=chrX:119693827..119693835,- | |||
|description=CAGE_peak_24_at_CUL4B_5end | |description=CAGE_peak_24_at_CUL4B_5end | ||
|id=chrX:119693827..119693835,- | |id=chrX:119693827..119693835,- | ||
|ontology_enrichment_celltype=CL:0002620!2.09e-14!23;CL:0000055!1.56e-12!180;CL:0000057!2.76e-12!75;CL:0000222!7.44e-09!119;CL:0000144!1.09e-07!625;CL:0000548!1.15e-07!679;CL:0000004!1.15e-07!679;CL:0000255!1.15e-07!679;CL:0000012!1.80e-07!682;CL:0000077!6.28e-07!19 | |ontology_enrichment_celltype=CL:0002620!2.09e-14!23;CL:0000055!1.56e-12!180;CL:0000057!2.76e-12!75;CL:0000222!7.44e-09!119;CL:0000144!1.09e-07!625;CL:0000548!1.15e-07!679;CL:0000004!1.15e-07!679;CL:0000255!1.15e-07!679;CL:0000012!1.80e-07!682;CL:0000077!6.28e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.02e-31;23!CL:0000138;3.38e-13;6!CL:0002602;1.34e-10;2!CL:0002593;9.19e-10;2!CL:0000153;8.17e-09;9!CL:0000447;8.17e-09;9!CL:0002595;1.80e-08;5!CL:0002564;4.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.49e-31,23;CL:0000057,2.04e-13,76;CL:0000058,3.38e-13,6;CL:0000138,3.38e-13,6;CL:0002602,1.19e-10,2;CL:0002593,1.32e-09,2;CL:0000153,8.18e-09,9;CL:0000447,8.18e-09,9;CL:0002595,1.85e-08,5;CL:0002564,4.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.16e-08!5;DOID:450!1.16e-08!5;DOID:66!1.16e-08!5;DOID:423!1.16e-08!5;DOID:0080000!1.16e-08!5;DOID:11722!1.16e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.63e-23;5!DOID:450;4.63e-23;5!DOID:66;4.63e-23;5!DOID:423;4.63e-23;5!DOID:0080000;4.63e-23;5!DOID:11722;4.63e-23;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.29e-23,5;DOID:450,3.29e-23,5;DOID:66,3.29e-23,5;DOID:423,3.29e-23,5;DOID:0080000,3.29e-23,5;DOID:11722,3.29e-23,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.22e-09!45;UBERON:0002416!3.22e-09!45;UBERON:0002097!4.99e-08!40;UBERON:0003102!8.21e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.66e-15;5!UBERON:0002216;2.66e-15;5!UBERON:0011134;2.66e-15;5!UBERON:0002209;2.66e-15;5!UBERON:0002213;2.66e-15;5!UBERON:0007844;2.66e-15;5!UBERON:0011138;2.66e-15;5!UBERON:0001130;2.66e-15;5!UBERON:0001066;2.66e-15;5!UBERON:0001468;2.66e-15;5!UBERON:0002097;3.68e-12;41!UBERON:0006444;1.34e-10;2!UBERON:0001995;1.34e-10;2!UBERON:0004715;1.34e-10;2!UBERON:0002456;9.19e-10;2!UBERON:0004905;1.35e-09;8!UBERON:0000982;1.35e-09;8!UBERON:0004770;1.35e-09;8!UBERON:0002199;1.39e-09;46!UBERON:0002416;1.39e-09;46!UBERON:0003834;1.80e-08;5!UBERON:0001533;1.80e-08;5!UBERON:0002418;2.48e-07;3!UBERON:0004755;2.48e-07;3!UBERON:0003102;2.48e-07;50!UBERON:0002242;4.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.50e-16,41;UBERON:0011135,2.77e-15,5;UBERON:0002216,2.77e-15,5;UBERON:0011134,2.77e-15,5;UBERON:0002209,2.77e-15,5;UBERON:0002213,2.77e-15,5;UBERON:0005856,2.77e-15,5;UBERON:0005866,2.77e-15,5;UBERON:0005863,2.77e-15,5;UBERON:0007844,2.77e-15,5;UBERON:0011138,2.77e-15,5;UBERON:0001130,2.77e-15,5;UBERON:0001066,2.77e-15,5;UBERON:0001468,2.77e-15,5;UBERON:0002199,3.00e-14,46;UBERON:0002416,3.00e-14,46;UBERON:0006444,1.19e-10,2;UBERON:0001995,1.19e-10,2;UBERON:0004715,1.19e-10,2;UBERON:0002456,1.32e-09,2;UBERON:0004905,1.38e-09,8;UBERON:0000982,1.38e-09,8;UBERON:0004770,1.38e-09,8;UBERON:0003834,1.85e-08,5;UBERON:0001533,1.85e-08,5;UBERON:0002418,2.29e-07,3;UBERON:0004755,2.29e-07,3;UBERON:0003102,3.91e-07,99;UBERON:0002242,4.82e-07,3;UBERON:0003068,4.82e-07,3;UBERON:0002328,4.82e-07,3;UBERON:0004880,4.82e-07,3 | |||
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| ||
|short_description=p24@CUL4B | |short_description=p24@CUL4B | ||
}} | }} |
Latest revision as of 06:27, 19 September 2015
Short description: | p24@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_CUL4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000371323_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | A6NE76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.49e-31 | 23 |
fibroblast | 2.04e-13 | 76 |
chondroblast | 3.38e-13 | 6 |
chondrocyte | 3.38e-13 | 6 |
annulus pulposus cell | 1.19e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.32e-09 | 2 |
GAG secreting cell | 8.18e-09 | 9 |
carbohydrate secreting cell | 8.18e-09 | 9 |
smooth muscle cell of the subclavian artery | 1.85e-08 | 5 |
nucleus pulposus cell of intervertebral disc | 4.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.50e-16 | 41 |
intervertebral cartilage | 2.77e-15 | 5 |
symphysis | 2.77e-15 | 5 |
nonsynovial joint | 2.77e-15 | 5 |
fibrous joint | 2.77e-15 | 5 |
cartilaginous joint | 2.77e-15 | 5 |
developing mesenchymal condensation | 2.77e-15 | 5 |
pre-cartilage condensation | 2.77e-15 | 5 |
cartilaginous condensation | 2.77e-15 | 5 |
cartilage element | 2.77e-15 | 5 |
post-cranial axial skeletal system | 2.77e-15 | 5 |
vertebral column | 2.77e-15 | 5 |
intervertebral disk | 2.77e-15 | 5 |
intervertebral joint | 2.77e-15 | 5 |
integument | 3.00e-14 | 46 |
integumental system | 3.00e-14 | 46 |
annulus fibrosus | 1.19e-10 | 2 |
fibrocartilage | 1.19e-10 | 2 |
annulus fibrosus disci intervertebralis | 1.19e-10 | 2 |
internal thoracic artery | 1.32e-09 | 2 |
articulation | 1.38e-09 | 8 |
skeletal joint | 1.38e-09 | 8 |
articular system | 1.38e-09 | 8 |
thoracic segment blood vessel | 1.85e-08 | 5 |
subclavian artery | 1.85e-08 | 5 |
cartilage tissue | 2.29e-07 | 3 |
skeletal tissue | 2.29e-07 | 3 |
surface structure | 3.91e-07 | 99 |
nucleus pulposus | 4.82e-07 | 3 |
axial mesoderm | 4.82e-07 | 3 |
notochord | 4.82e-07 | 3 |
chordamesoderm | 4.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.29e-23 | 5 |
myotonic disease | 3.29e-23 | 5 |
muscle tissue disease | 3.29e-23 | 5 |
myopathy | 3.29e-23 | 5 |
muscular disease | 3.29e-23 | 5 |
myotonic dystrophy | 3.29e-23 | 5 |