FFCP PHASE1:Hg19::chr3:111451248..111451251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257068 | |EntrezGene=257068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26462 | |HGNC=26462 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000474484_5end | |association_with_transcript=-56bp_to_ENST00000474484_5end | ||
|cluster_id=chr3:111451248..111451251,+ | |||
|coexpression_cluster_id=C4264 | |||
|description=CAGE_peak_6_at_PLCXD2_5end | |description=CAGE_peak_6_at_PLCXD2_5end | ||
|id=chr3:111451248..111451251,+ | |id=chr3:111451248..111451251,+ | ||
|ontology_enrichment_celltype=CL:0000223!3.59e-19!59;CL:0002076!2.37e-18!43;CL:0000066!1.18e-16!254;CL:0002368!8.47e-12!13;CL:0000159!1.56e-07!2;CL:0002251!6.94e-07!21 | |ontology_enrichment_celltype=CL:0000223!3.59e-19!59;CL:0002076!2.37e-18!43;CL:0000066!1.18e-16!254;CL:0002368!8.47e-12!13;CL:0000159!1.56e-07!2;CL:0002251!6.94e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000244;3.58e-16;4!CL:0000731;3.58e-16;4!CL:0002076;7.68e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.32e-16,4;CL:0000731,3.32e-16,4;CL:0002076,3.14e-09,42;CL:0000066,1.41e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.43e-09;2!UBERON:0010056;3.43e-09;2 | |||
|ontology_enrichment_disease=DOID:305!2.69e-20!106;DOID:0050687!1.83e-15!143;DOID:1749!3.47e-14!14;DOID:7!2.09e-09!39;DOID:4468!2.79e-08!2;DOID:162!9.79e-08!235;DOID:14566!2.04e-07!239 | |ontology_enrichment_disease=DOID:305!2.69e-20!106;DOID:0050687!1.83e-15!143;DOID:1749!3.47e-14!14;DOID:7!2.09e-09!39;DOID:4468!2.79e-08!2;DOID:162!9.79e-08!235;DOID:14566!2.04e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.96e-31;2!DOID:1749;1.67e-10;14!DOID:3910;3.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.60e-31,2;DOID:1749,1.57e-10,14;DOID:3910,3.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!5.63e-14!4;UBERON:0004785!5.63e-14!4;UBERON:0000344!6.89e-13!12;UBERON:0003729!3.48e-11!5;UBERON:0004119!9.90e-10!169;UBERON:0000925!9.90e-10!169;UBERON:0006595!9.90e-10!169;UBERON:0005911!1.68e-08!82;UBERON:0000974!4.11e-08!10;UBERON:0006554!4.95e-07!44;UBERON:0000365!6.03e-07!5;UBERON:0007499!6.33e-07!25;UBERON:0001004!7.72e-07!72;UBERON:0001008!7.94e-07!45 | |ontology_enrichment_uberon=UBERON:0003343!5.63e-14!4;UBERON:0004785!5.63e-14!4;UBERON:0000344!6.89e-13!12;UBERON:0003729!3.48e-11!5;UBERON:0004119!9.90e-10!169;UBERON:0000925!9.90e-10!169;UBERON:0006595!9.90e-10!169;UBERON:0005911!1.68e-08!82;UBERON:0000974!4.11e-08!10;UBERON:0006554!4.95e-07!44;UBERON:0000365!6.03e-07!5;UBERON:0007499!6.33e-07!25;UBERON:0001004!7.72e-07!72;UBERON:0001008!7.94e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.01e-16;4!UBERON:0004785;2.01e-16;4!UBERON:0000365;3.88e-13;5!UBERON:0000974;2.83e-11;6!UBERON:0005910;4.15e-11;6!UBERON:0004903;3.71e-09;2!UBERON:0002173;3.71e-09;2!UBERON:0002186;3.71e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.42e-16,4;UBERON:0004785,1.42e-16,4;UBERON:0000365,3.65e-13,5;UBERON:0005910,3.95e-11,6;UBERON:0004903,3.71e-09,2;UBERON:0002173,3.71e-09,2;UBERON:0002186,3.71e-09,2;UBERON:0000974,3.54e-07,10 | |||
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| ||
|short_description=p6@PLCXD2 | |short_description=p6@PLCXD2 | ||
}} | }} |
Latest revision as of 12:46, 19 September 2015
Short description: | p6@PLCXD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLCXD2_5end |
Coexpression cluster: | C4264_Small_oral_malignant_Prostate_epidermoid_argyrophil_Urothelial |
Association with transcript: | -56bp_to_ENST00000474484_5end |
EntrezGene: | PLCXD2 |
HGNC: | 26462 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.32e-16 | 4 |
urothelial cell | 3.32e-16 | 4 |
endo-epithelial cell | 3.14e-09 | 42 |
epithelial cell | 1.41e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.42e-16 | 4 |
respiratory system mucosa | 1.42e-16 | 4 |
urothelium | 3.65e-13 | 5 |
transitional epithelium | 3.95e-11 | 6 |
bronchoalveolar duct junction | 3.71e-09 | 2 |
alveolar duct | 3.71e-09 | 2 |
bronchiole | 3.71e-09 | 2 |
neck | 3.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.60e-31 | 2 |
squamous cell carcinoma | 1.57e-10 | 14 |
lung adenocarcinoma | 3.71e-09 | 2 |