FFCP PHASE1:Hg19::chr14:79745947..79745959,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:79745947..79745959,+
|short_description=p7@NRXN3
|description=CAGE_peak_7_at_NRXN3_5end
|association_with_transcript=191bp_to_ENST00000281127_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9369 | |EntrezGene=9369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |HGNC=8010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_ENST00000281127_5end | |||
|cluster_id=chr14:79745947..79745959,+ | |||
|description=CAGE_peak_7_at_NRXN3_5end | |||
|id=chr14:79745947..79745959,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.63e-13;3!CL:0002579;6.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.64e-13,3;CL:0002579,7.75e-07,3;CL:0000632,8.94e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.20e-14;3 | |||
|ontology_enrichment_disease=DOID:2394!9.98e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.44e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-16!115;UBERON:0002616!1.31e-12!59;UBERON:0001049!1.90e-11!57;UBERON:0005068!1.90e-11!57;UBERON:0006241!1.90e-11!57;UBERON:0007135!1.90e-11!57;UBERON:0000955!3.00e-11!69;UBERON:0006238!3.00e-11!69;UBERON:0001017!6.00e-11!82;UBERON:0005743!7.78e-11!86;UBERON:0003075!1.82e-10!86;UBERON:0007284!1.82e-10!86;UBERON:0000073!1.56e-09!94;UBERON:0001016!1.56e-09!94;UBERON:0002346!1.61e-09!90;UBERON:0003688!1.66e-08!6;UBERON:0002358!1.66e-08!6;UBERON:0003684!1.66e-08!6;UBERON:0001178!1.66e-08!6;UBERON:0001893!2.20e-08!34;UBERON:0001869!2.55e-08!32;UBERON:0002791!5.81e-08!33;UBERON:0002020!1.07e-07!34;UBERON:0003528!1.07e-07!34;UBERON:0004457!1.21e-07!12;UBERON:0000042!1.21e-07!12;UBERON:0000956!2.20e-07!25;UBERON:0000203!2.20e-07!25;UBERON:0005631!2.59e-07!14;UBERON:0000158!2.59e-07!14;UBERON:0004871!2.61e-07!8;UBERON:0003133!2.99e-07!48;UBERON:0002780!5.92e-07!41;UBERON:0001890!5.92e-07!41;UBERON:0006240!5.92e-07!41;UBERON:0000062!6.86e-07!511;UBERON:0000064!7.01e-07!219;UBERON:0003076!7.72e-07!15;UBERON:0003057!7.72e-07!15;UBERON:0004121!7.90e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.35e-18;6!UBERON:0002358;9.35e-18;6!UBERON:0003684;9.35e-18;6!UBERON:0001178;9.35e-18;6!UBERON:0004457;1.68e-16;9!UBERON:0000042;1.68e-16;9!UBERON:0005904;2.42e-10;4!UBERON:0002680;5.46e-08;9!UBERON:0001895;5.46e-08;9!UBERON:0002037;2.60e-07;6!UBERON:0006947;6.99e-07;3!UBERON:0004054;6.99e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.06e-17,6;UBERON:0002358,1.06e-17,6;UBERON:0003684,1.06e-17,6;UBERON:0001178,1.06e-17,6;UBERON:0004457,3.45e-12,12;UBERON:0000042,3.45e-12,12;UBERON:0005904,1.74e-10,4;UBERON:0002680,5.62e-08,9;UBERON:0001895,5.62e-08,9;UBERON:0010092,5.62e-08,9;UBERON:0002037,2.47e-07,6;UBERON:0006215,2.47e-07,6;UBERON:0003076,4.54e-07,15;UBERON:0003057,4.54e-07,15;UBERON:0006947,6.52e-07,3;UBERON:0004054,6.52e-07,3;UBERON:0004458,8.36e-07,49 | |||
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| ||
|short_description=p7@NRXN3 | |||
}} | }} |
Latest revision as of 07:02, 16 September 2015
Short description: | p7@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NRXN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 191bp_to_ENST00000281127_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.64e-13 | 3 |
omentum preadipocyte | 7.75e-07 | 3 |
hepatic stellate cell | 8.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.06e-17 | 6 |
peritoneum | 1.06e-17 | 6 |
abdominal cavity | 1.06e-17 | 6 |
visceral peritoneum | 1.06e-17 | 6 |
cavity lining | 3.45e-12 | 12 |
serous membrane | 3.45e-12 | 12 |
duct of male reproductive system | 1.74e-10 | 4 |
regional part of metencephalon | 5.62e-08 | 9 |
metencephalon | 5.62e-08 | 9 |
future metencephalon | 5.62e-08 | 9 |
cerebellum | 2.47e-07 | 6 |
rhombic lip | 2.47e-07 | 6 |
posterior neural tube | 4.54e-07 | 15 |
chordal neural plate | 4.54e-07 | 15 |
male genital duct | 6.52e-07 | 3 |
internal male genitalia | 6.52e-07 | 3 |
body cavity or lining | 8.36e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.73e-07 | 14 |