FFCP PHASE1:Hg19::chrX:49012307..49012347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:49012307..49012347,+ | |||
|description=CAGE_peak_at_chrX:49012307..49012347,+ | |description=CAGE_peak_at_chrX:49012307..49012347,+ | ||
|id=chrX:49012307..49012347,+ | |id=chrX:49012307..49012347,+ | ||
|ontology_enrichment_celltype=CL:0000012!5.48e-08!682;CL:0000548!1.31e-07!679;CL:0000004!1.31e-07!679;CL:0000255!1.31e-07!679;CL:1000449!6.72e-07!16 | |ontology_enrichment_celltype=CL:0000012!5.48e-08!682;CL:0000548!1.31e-07!679;CL:0000004!1.31e-07!679;CL:0000255!1.31e-07!679;CL:1000449!6.72e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.75e-08;36!CL:0002188;9.32e-08;5!CL:1000746;1.33e-07;7!CL:1000612;1.33e-07;7!CL:1000497;7.15e-07;17!CL:0002518;7.15e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.17e-10,36;CL:0002078,2.23e-09,45;CL:0002188,2.21e-08,5;CL:1000746,4.75e-08,7;CL:1000612,4.75e-08,7;CL:1000497,4.24e-07,17;CL:0002518,4.24e-07,17;CL:0002681,7.68e-07,12;CL:0002584,7.68e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!6.72e-07!16;UBERON:0001285!6.72e-07!16;UBERON:0007684!6.72e-07!16;UBERON:0003220!6.72e-07!16;UBERON:0004208!6.72e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.33e-07;7!UBERON:0001229;1.33e-07;7!UBERON:0000353;1.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,4.75e-08,7;UBERON:0000074,4.75e-08,7;UBERON:0001229,4.75e-08,7;UBERON:0001230,4.75e-08,7;UBERON:0003220,4.75e-08,7;UBERON:0005749,4.75e-08,7;UBERON:0004199,4.75e-08,7;UBERON:0004209,4.75e-08,7;UBERON:0004198,4.75e-08,7;UBERON:0000353,8.00e-08,15;UBERON:0002049,1.06e-07,78;UBERON:0007798,1.06e-07,78;UBERON:0005103,6.91e-07,8;UBERON:0000083,6.91e-07,8;UBERON:0009201,6.91e-07,8;UBERON:0006553,6.91e-07,8;UBERON:0003074,6.91e-07,8;UBERON:0003060,6.91e-07,8;UBERON:0001225,7.68e-07,12;UBERON:0008987,7.68e-07,12 | |||
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| ||
|short_description=p@chrX:49012307..49012347,+ | |short_description=p@chrX:49012307..49012347,+ | ||
}} | }} |
Latest revision as of 08:39, 1 August 2015
Short description: | p@chrX:49012307..49012347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:49012307..49012347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.17e-10 | 36 |
meso-epithelial cell | 2.23e-09 | 45 |
glomerular endothelial cell | 2.21e-08 | 5 |
glomerular cell | 4.75e-08 | 7 |
kidney corpuscule cell | 4.75e-08 | 7 |
kidney cell | 4.24e-07 | 17 |
kidney epithelial cell | 4.24e-07 | 17 |
kidney cortical cell | 7.68e-07 | 12 |
renal cortical epithelial cell | 7.68e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 4.75e-08 | 7 |
renal glomerulus | 4.75e-08 | 7 |
renal corpuscle | 4.75e-08 | 7 |
glomerular capsule | 4.75e-08 | 7 |
metanephric mesenchyme | 4.75e-08 | 7 |
glomerular tuft | 4.75e-08 | 7 |
S-shaped body | 4.75e-08 | 7 |
renal vesicle | 4.75e-08 | 7 |
comma-shaped body | 4.75e-08 | 7 |
parenchyma | 8.00e-08 | 15 |
vasculature | 1.06e-07 | 78 |
vascular system | 1.06e-07 | 78 |
mesonephric epithelium | 6.91e-07 | 8 |
mesonephric tubule | 6.91e-07 | 8 |
nephric duct | 6.91e-07 | 8 |
renal duct | 6.91e-07 | 8 |
mesonephric duct | 6.91e-07 | 8 |
pronephric duct | 6.91e-07 | 8 |
cortex of kidney | 7.68e-07 | 12 |
renal parenchyma | 7.68e-07 | 12 |