FFCP PHASE1:Hg19::chr14:88940266..88940280,-: Difference between revisions
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|id=chr14:88940266..88940280,-
|short_description=p11@PTPN21
|description=CAGE_peak_11_at_PTPN21_5end
|association_with_transcript=0bp_to_ENST00000557249_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11099 | |EntrezGene=11099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9651 | |HGNC=9651 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557249_5end | |||
|cluster_id=chr14:88940266..88940280,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_11_at_PTPN21_5end | |||
|id=chr14:88940266..88940280,- | |||
|ontology_enrichment_celltype=CL:0002541!6.08e-14!3;CL:0002563!1.22e-09!4;CL:0002537!2.36e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.46e-22;3!CL:0000349;2.34e-13;19!CL:0002537;2.77e-13;5!CL:0002097;3.71e-09;2!CL:0001014;5.71e-09;2!CL:0001016;5.71e-09;2!CL:0000150;8.17e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.53e-22,3;CL:0000349,2.23e-13,19;CL:0002537,2.68e-13,5;CL:0002097,3.71e-09,2;CL:0001014,5.94e-09,2;CL:0001016,5.94e-09,2;CL:0000150,8.60e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.57e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.88e-18!14;UBERON:0000158!1.88e-18!14;UBERON:0000476!6.08e-14!3;UBERON:0000920!6.08e-14!3;UBERON:0004923!5.45e-13!57;UBERON:0003688!3.84e-11!6;UBERON:0002358!3.84e-11!6;UBERON:0003684!3.84e-11!6;UBERON:0001178!3.84e-11!6;UBERON:0003124!2.55e-10!7;UBERON:0000478!3.47e-10!24;UBERON:0000305!8.92e-10!7;UBERON:0000310!1.14e-09!10;UBERON:0001242!1.22e-09!4;UBERON:0001262!1.22e-09!4;UBERON:0004786!1.22e-09!4;UBERON:0004808!1.22e-09!4;UBERON:0001277!1.22e-09!4;UBERON:0001443!9.17e-09!11;UBERON:0004871!1.48e-08!8;UBERON:0003350!8.49e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.85e-25;10!UBERON:0000158;4.85e-25;10!UBERON:0003124;9.46e-22;3!UBERON:0000920;9.46e-22;3!UBERON:0007029;1.31e-16;1!UBERON:0000478;3.69e-16;24!UBERON:0000305;9.31e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.26e-27,14;UBERON:0000158,1.26e-27,14;UBERON:0000920,8.53e-22,3;UBERON:0003124,1.28e-20,7;UBERON:0007029,1.04e-16,1;UBERON:0000478,3.63e-16,24;UBERON:0000305,9.11e-10,7;UBERON:0004871,1.17e-08,8;UBERON:0004923,3.66e-08,66 | |||
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| ||
|short_description=p11@PTPN21 | |||
}} | }} |
Latest revision as of 10:37, 16 September 2015
Short description: | p11@PTPN21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PTPN21_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000557249_5end |
EntrezGene: | PTPN21 |
HGNC: | 9651 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.53e-22 | 3 |
extraembryonic cell | 2.23e-13 | 19 |
amnion mesenchymal stem cell | 2.68e-13 | 5 |
cortical cell of adrenal gland | 3.71e-09 | 2 |
CD1a-positive Langerhans cell | 5.94e-09 | 2 |
immature CD1a-positive Langerhans cell | 5.94e-09 | 2 |
glandular epithelial cell | 8.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.26e-27 | 14 |
membranous layer | 1.26e-27 | 14 |
egg chorion | 8.53e-22 | 3 |
chorion | 1.28e-20 | 7 |
surface | 1.04e-16 | 1 |
extraembryonic structure | 3.63e-16 | 24 |
amnion | 9.11e-10 | 7 |
somatic layer of lateral plate mesoderm | 1.17e-08 | 8 |
organ component layer | 3.66e-08 | 66 |