FFCP PHASE1:Hg19::chr3:135043585..135043591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:135043585..135043591,- | |||
|coexpression_cluster_id=C886 | |||
|description=CAGE_peak_at_chr3:135043585..135043591,- | |description=CAGE_peak_at_chr3:135043585..135043591,- | ||
|id=chr3:135043585..135043591,- | |id=chr3:135043585..135043591,- | ||
|ontology_enrichment_celltype=CL:1001319!1.07e-09!1;CL:1000600!1.07e-09!1 | |ontology_enrichment_celltype=CL:1001319!1.07e-09!1;CL:1000600!1.07e-09!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.45e-18;4!UBERON:0007284;9.45e-18;4 | |||
|ontology_enrichment_disease=DOID:9119!3.71e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;2.62e-23;3!DOID:3908;1.40e-14;5!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,2.62e-23,3;DOID:3908,1.40e-14,5;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002771!2.52e-12!3;UBERON:0002134!1.80e-10!1;UBERON:0005208!1.80e-10!1;UBERON:0005946!1.80e-10!1;UBERON:0005965!1.80e-10!1;UBERON:0002078!1.80e-10!1;UBERON:0001871!2.38e-10!7;UBERON:0001950!3.24e-10!20;UBERON:0004645!1.07e-09!1;UBERON:0001256!1.07e-09!1;UBERON:0001259!1.07e-09!1;UBERON:0002022!1.17e-09!1;UBERON:0002619!2.59e-09!22;UBERON:0000956!3.21e-08!25;UBERON:0000203!3.21e-08!25 | |ontology_enrichment_uberon=UBERON:0002771!2.52e-12!3;UBERON:0002134!1.80e-10!1;UBERON:0005208!1.80e-10!1;UBERON:0005946!1.80e-10!1;UBERON:0005965!1.80e-10!1;UBERON:0002078!1.80e-10!1;UBERON:0001871!2.38e-10!7;UBERON:0001950!3.24e-10!20;UBERON:0004645!1.07e-09!1;UBERON:0001256!1.07e-09!1;UBERON:0001259!1.07e-09!1;UBERON:0002022!1.17e-09!1;UBERON:0002619!2.59e-09!22;UBERON:0000956!3.21e-08!25;UBERON:0000203!3.21e-08!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.34e-66;1!UBERON:0005208;3.34e-66;1!UBERON:0004145;3.34e-66;1!UBERON:0005946;3.34e-66;1!UBERON:0005965;3.34e-66;1!UBERON:0002078;3.34e-66;1!UBERON:0002081;5.96e-34;2!UBERON:0002133;5.96e-34;2!UBERON:0003978;3.66e-23;3!UBERON:0004151;3.66e-23;3!UBERON:0000946;3.66e-23;3!UBERON:0002021;1.71e-14;5!UBERON:0010313;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.39e-66,1;UBERON:0005208,2.39e-66,1;UBERON:0005946,2.39e-66,1;UBERON:0005965,2.39e-66,1;UBERON:0002078,2.39e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0002133,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0003978,3.27e-23,3;UBERON:0009751,3.27e-23,3;UBERON:0004151,3.27e-23,3;UBERON:0000946,3.27e-23,3;UBERON:0002523,3.27e-23,3;UBERON:0005983,3.27e-23,3;UBERON:0004145,3.27e-23,3;UBERON:0002165,3.27e-23,3;UBERON:0002062,3.27e-23,3;UBERON:0007280,3.27e-23,3;UBERON:0002021,1.83e-14,5;UBERON:0004797,8.99e-11,7;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p@chr3:135043585..135043591,- | |short_description=p@chr3:135043585..135043591,- | ||
}} | }} |
Latest revision as of 16:07, 29 July 2015
Short description: | p@chr3:135043585..135043591, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:135043585..135043591, - |
Coexpression cluster: | C886_large_endometrial_Fibroblast_renal_hepatoblastoma_hepatocellular_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.39e-66 | 1 |
right atrium valve | 2.39e-66 | 1 |
outflow tract of atrium | 2.39e-66 | 1 |
outflow part of right atrium | 2.39e-66 | 1 |
right cardiac atrium | 2.39e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
atrioventricular valve | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
valve | 3.27e-23 | 3 |
cardiac mesenchyme | 3.27e-23 | 3 |
cardiac chamber | 3.27e-23 | 3 |
cardial valve | 3.27e-23 | 3 |
tunica intima | 3.27e-23 | 3 |
heart layer | 3.27e-23 | 3 |
outflow tract | 3.27e-23 | 3 |
endocardium | 3.27e-23 | 3 |
endocardial cushion | 3.27e-23 | 3 |
presumptive endocardium | 3.27e-23 | 3 |
occipital lobe | 1.83e-14 | 5 |
blood vessel layer | 8.99e-11 | 7 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |
epithelial fold | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.62e-23 | 3 |
non-small cell lung carcinoma | 1.40e-14 | 5 |
lung carcinoma | 1.04e-08 | 9 |