FFCP PHASE1:Hg19::chr3:164169079..164169088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:164169079..164169088,+ | |||
|description=CAGE_peak_at_chr3:164169079..164169088,+ | |description=CAGE_peak_at_chr3:164169079..164169088,+ | ||
|id=chr3:164169079..164169088,+ | |id=chr3:164169079..164169088,+ | ||
|ontology_enrichment_celltype=CL:0002579!3.01e-10!3;CL:0002580!4.09e-10!3;CL:0002615!6.05e-10!3;CL:0002334!6.37e-09!12;CL:0000057!2.83e-07!75;CL:1000306!3.19e-07!4;CL:0002547!3.19e-07!4;CL:0002617!4.32e-07!2;CL:0000136!9.53e-07!15 | |ontology_enrichment_celltype=CL:0002579!3.01e-10!3;CL:0002580!4.09e-10!3;CL:0002615!6.05e-10!3;CL:0002334!6.37e-09!12;CL:0000057!2.83e-07!75;CL:1000306!3.19e-07!4;CL:0002547!3.19e-07!4;CL:0002617!4.32e-07!2;CL:0000136!9.53e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002579;8.94e-25;3!CL:0000511;3.25e-19;1!CL:0002625;3.25e-19;1!CL:0000216;3.25e-19;1!CL:0002097;2.72e-10;2!CL:0000746;1.82e-07;3!CL:0000174;2.79e-07;3!CL:0002615;2.79e-07;3!CL:0002334;6.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,8.95e-25,3;CL:0000511,1.88e-19,1;CL:0002625,1.88e-19,1;CL:0000216,1.88e-19,1;CL:0002097,2.72e-10,2;CL:0000746,1.82e-07,3;CL:0000513,1.82e-07,3;CL:0000174,2.79e-07,3;CL:0002615,3.35e-07,3;CL:0002334,6.54e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.26e-15;5!CL:0000513;1.82e-07;3 | |||
|ontology_enrichment_disease=DOID:3350!2.42e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:6193;3.25e-19;1!DOID:3350;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.71e-19,1;DOID:3350,2.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.79e-18!6;UBERON:0002358!1.79e-18!6;UBERON:0003684!1.79e-18!6;UBERON:0001178!1.79e-18!6;UBERON:0002046!2.18e-15!5;UBERON:0004117!2.18e-15!5;UBERON:0007689!2.18e-15!5;UBERON:0007123!2.18e-15!5;UBERON:0003091!2.18e-15!5;UBERON:0004457!7.66e-09!12;UBERON:0000042!7.66e-09!12;UBERON:0000341!1.47e-07!2;UBERON:0000310!1.49e-07!10;UBERON:0000415!3.19e-07!4;UBERON:0007240!3.19e-07!4;UBERON:0005742!3.19e-07!4;UBERON:0005734!3.19e-07!4;UBERON:0004664!3.19e-07!4;UBERON:0004663!3.19e-07!4;UBERON:0001443!7.91e-07!11;UBERON:0009722!8.97e-07!11;UBERON:0007690!8.97e-07!11 | |ontology_enrichment_uberon=UBERON:0003688!1.79e-18!6;UBERON:0002358!1.79e-18!6;UBERON:0003684!1.79e-18!6;UBERON:0001178!1.79e-18!6;UBERON:0002046!2.18e-15!5;UBERON:0004117!2.18e-15!5;UBERON:0007689!2.18e-15!5;UBERON:0007123!2.18e-15!5;UBERON:0003091!2.18e-15!5;UBERON:0004457!7.66e-09!12;UBERON:0000042!7.66e-09!12;UBERON:0000341!1.47e-07!2;UBERON:0000310!1.49e-07!10;UBERON:0000415!3.19e-07!4;UBERON:0007240!3.19e-07!4;UBERON:0005742!3.19e-07!4;UBERON:0005734!3.19e-07!4;UBERON:0004664!3.19e-07!4;UBERON:0004663!3.19e-07!4;UBERON:0001443!7.91e-07!11;UBERON:0009722!8.97e-07!11;UBERON:0007690!8.97e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.11e-27;6!UBERON:0002358;2.11e-27;6!UBERON:0003684;2.11e-27;6!UBERON:0001178;2.11e-27;6!UBERON:0001136;3.25e-19;1!UBERON:0001343;3.25e-19;1!UBERON:0004910;3.25e-19;1!UBERON:0004813;3.25e-19;1!UBERON:0004457;1.58e-18;9!UBERON:0000042;1.58e-18;9!UBERON:0002046;1.26e-15;5!UBERON:0000341;1.80e-10;2!UBERON:0004909;2.72e-10;2!UBERON:0002369;2.79e-07;3!UBERON:0001235;2.79e-07;3!UBERON:0006858;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.78e-27,6;UBERON:0002358,2.78e-27,6;UBERON:0003684,2.78e-27,6;UBERON:0001178,2.78e-27,6;UBERON:0001136,1.88e-19,1;UBERON:0001343,1.88e-19,1;UBERON:0004910,1.88e-19,1;UBERON:0005154,1.88e-19,1;UBERON:0005295,1.88e-19,1;UBERON:0004813,1.88e-19,1;UBERON:0005297,1.88e-19,1;UBERON:0005294,1.88e-19,1;UBERON:0010141,1.88e-19,1;UBERON:0005891,1.88e-19,1;UBERON:0002046,1.30e-15,5;UBERON:0004117,1.30e-15,5;UBERON:0007689,1.30e-15,5;UBERON:0007123,1.30e-15,5;UBERON:0003091,1.30e-15,5;UBERON:0004457,5.17e-14,12;UBERON:0000042,5.17e-14,12;UBERON:0000341,1.72e-10,2;UBERON:0004909,2.07e-10,2;UBERON:0004871,5.80e-10,8;UBERON:0009722,1.33e-07,11;UBERON:0007690,1.33e-07,11;UBERON:0002369,2.79e-07,3;UBERON:0001235,2.79e-07,3;UBERON:0006858,2.79e-07,3 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635795703478686,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.644349290496095,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.460385919864187,0.561320188866147,1.02511319404561,1.53512174720011,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,1.20390222730132,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,2.61870874610114,0,0,0.112131862580613,2.41859201457027,3.43599221228973,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635795703478686,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.644349290496095,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.460385919864187,0.561320188866147,1.02511319404561,1.53512174720011,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,1.20390222730132,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968440444553616,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.07220795687463,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,2.61870874610114,0,0,0.112131862580613,2.41859201457027,3.43599221228973,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr3:164169079..164169088,+ | |short_description=p@chr3:164169079..164169088,+ | ||
}} | }} |
Latest revision as of 17:53, 29 July 2015
Short description: | p@chr3:164169079..164169088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:164169079..164169088, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 8.95e-25 | 3 |
androgen binding protein secreting cell | 1.88e-19 | 1 |
seminiferous tubule epithelial cell | 1.88e-19 | 1 |
Sertoli cell | 1.88e-19 | 1 |
cortical cell of adrenal gland | 2.72e-10 | 2 |
cardiac muscle cell | 1.82e-07 | 3 |
cardiac muscle myoblast | 1.82e-07 | 3 |
steroid hormone secreting cell | 2.79e-07 | 3 |
adipocyte of omentum tissue | 3.35e-07 | 3 |
preadipocyte | 6.54e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.78e-27 | 6 |
peritoneum | 2.78e-27 | 6 |
abdominal cavity | 2.78e-27 | 6 |
visceral peritoneum | 2.78e-27 | 6 |
mesothelium | 1.88e-19 | 1 |
seminiferous tubule of testis | 1.88e-19 | 1 |
epithelium of male gonad | 1.88e-19 | 1 |
epithelial cord | 1.88e-19 | 1 |
sex cord | 1.88e-19 | 1 |
seminiferous tubule epithelium | 1.88e-19 | 1 |
testis sex cord | 1.88e-19 | 1 |
genital ridge | 1.88e-19 | 1 |
primitive sex cord of indifferent gonad | 1.88e-19 | 1 |
coelomic epithelium | 1.88e-19 | 1 |
thyroid gland | 1.30e-15 | 5 |
pharyngeal pouch | 1.30e-15 | 5 |
thyroid diverticulum | 1.30e-15 | 5 |
pharyngeal pouch 2 | 1.30e-15 | 5 |
thyroid primordium | 1.30e-15 | 5 |
cavity lining | 5.17e-14 | 12 |
serous membrane | 5.17e-14 | 12 |
throat | 1.72e-10 | 2 |
epithelium of gonad | 2.07e-10 | 2 |
somatic layer of lateral plate mesoderm | 5.80e-10 | 8 |
entire pharyngeal arch endoderm | 1.33e-07 | 11 |
early pharyngeal endoderm | 1.33e-07 | 11 |
adrenal gland | 2.79e-07 | 3 |
adrenal cortex | 2.79e-07 | 3 |
adrenal/interrenal gland | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.71e-19 | 1 |
mesenchymal cell neoplasm | 2.49e-10 | 2 |