FFCP PHASE1:Hg19::chr3:184032313..184032416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1981 | |EntrezGene=1981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3296 | |HGNC=3296 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFM1,F8WB97,C9K073,C9JF13,C9JWH9,F8WCF2,C9JWH7,C9J2Z7,C9JIH5 | |UniProt=E9PFM1,F8WB97,C9K073,C9JF13,C9JWH9,F8WCF2,C9JWH7,C9J2Z7,C9JIH5 | ||
|association_with_transcript=0bp_to_ENST00000350481,ENST00000382330,ENST00000392537,ENST00000413967,ENST00000421110,ENST00000426123,ENST00000440448,ENST00000442406,ENST00000444134,ENST00000450424,ENST00000455679,ENST00000485712,uc003fno.1,uc003fnp.2,uc003fnq.2,uc003fnr.2,uc003fns.2,uc003fnt.2,uc010hxw.1,uc010hxx.2,uc010hxy.2_5end | |association_with_transcript=0bp_to_ENST00000350481,ENST00000382330,ENST00000392537,ENST00000413967,ENST00000421110,ENST00000426123,ENST00000440448,ENST00000442406,ENST00000444134,ENST00000450424,ENST00000455679,ENST00000485712,uc003fno.1,uc003fnp.2,uc003fnq.2,uc003fnr.2,uc003fns.2,uc003fnt.2,uc010hxw.1,uc010hxx.2,uc010hxy.2_5end | ||
|cluster_id=chr3:184032313..184032416,+ | |||
|description=CAGE_peak_1_at_EIF4G1_5end | |description=CAGE_peak_1_at_EIF4G1_5end | ||
|id=chr3:184032313..184032416,+ | |id=chr3:184032313..184032416,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.03e-29!254;CL:0002321!6.88e-20!248;CL:0000220!1.37e-19!246;CL:0000548!1.07e-18!679;CL:0000004!1.07e-18!679;CL:0000255!1.07e-18!679;CL:0000012!1.39e-17!682;CL:0000076!2.42e-12!62;CL:0000144!1.50e-09!625;CL:0000063!3.92e-09!578;CL:0000222!4.60e-08!119;CL:0000055!5.73e-08!180;CL:0000223!2.10e-07!59;CL:1000449!2.52e-07!16;CL:0002371!9.15e-07!591 | |ontology_enrichment_celltype=CL:0000066!3.03e-29!254;CL:0002321!6.88e-20!248;CL:0000220!1.37e-19!246;CL:0000548!1.07e-18!679;CL:0000004!1.07e-18!679;CL:0000255!1.07e-18!679;CL:0000012!1.39e-17!682;CL:0000076!2.42e-12!62;CL:0000144!1.50e-09!625;CL:0000063!3.92e-09!578;CL:0000222!4.60e-08!119;CL:0000055!5.73e-08!180;CL:0000223!2.10e-07!59;CL:1000449!2.52e-07!16;CL:0002371!9.15e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.78e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.69e-29,253;CL:0002321,2.52e-20,250;CL:0000076,7.88e-12,63;CL:0000222,2.17e-08,121;CL:0000223,8.79e-08,58;CL:1000449,2.80e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.41e-12!235;DOID:14566!1.40e-11!239;DOID:305!4.79e-08!106;DOID:0050687!1.54e-07!143 | |ontology_enrichment_disease=DOID:162!2.41e-12!235;DOID:14566!1.40e-11!239;DOID:305!4.79e-08!106;DOID:0050687!1.54e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.41e-12,235;DOID:14566,1.40e-11,239;DOID:305,4.79e-08,106;DOID:0050687,1.54e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.71e-14!238;UBERON:0009142!3.71e-14!238;UBERON:0002100!6.71e-12!216;UBERON:0003914!7.86e-12!118;UBERON:0001048!1.33e-10!168;UBERON:0000466!3.51e-10!126;UBERON:0009569!6.21e-10!113;UBERON:0005177!8.10e-10!107;UBERON:0005256!1.13e-09!143;UBERON:0005172!4.25e-09!55;UBERON:0005173!4.25e-09!55;UBERON:0004119!5.98e-08!169;UBERON:0000925!5.98e-08!169;UBERON:0006595!5.98e-08!169;UBERON:0000490!7.47e-08!138;UBERON:0000077!9.86e-08!130;UBERON:0000464!1.71e-07!104;UBERON:0004211!2.52e-07!16;UBERON:0001285!2.52e-07!16;UBERON:0007684!2.52e-07!16;UBERON:0003220!2.52e-07!16;UBERON:0004208!2.52e-07!16;UBERON:0001851!2.58e-07!16;UBERON:0001041!3.11e-07!98;UBERON:0002417!4.02e-07!61;UBERON:0000916!4.02e-07!61;UBERON:0000080!5.71e-07!18;UBERON:0002120!5.71e-07!18;UBERON:0004875!5.71e-07!18;UBERON:0005721!5.71e-07!18;UBERON:0005754!5.71e-07!18;UBERON:0007297!5.71e-07!18;UBERON:0006555!5.85e-07!17;UBERON:0005103!5.85e-07!17;UBERON:0000083!5.85e-07!17;UBERON:0009201!5.85e-07!17;UBERON:0004819!5.85e-07!17;UBERON:0006553!5.85e-07!17;UBERON:0003074!5.85e-07!17;UBERON:0003060!5.85e-07!17;UBERON:0000119!6.33e-07!312;UBERON:0003887!7.95e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.78e-07;15!UBERON:0004819;2.78e-07;15!UBERON:0001285;2.78e-07;15!UBERON:0007684;2.78e-07;15!UBERON:0001851;2.80e-07;15!UBERON:0006554;4.28e-07;30!UBERON:0001008;4.28e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.26e-14,199;UBERON:0005177,2.02e-12,101;UBERON:0003914,1.07e-11,117;UBERON:0009569,3.02e-10,112;UBERON:0000490,4.30e-09,148;UBERON:0005172,5.67e-09,54;UBERON:0005173,5.67e-09,54;UBERON:0003104,5.74e-09,160;UBERON:0009142,5.74e-09,160;UBERON:0005256,1.07e-08,122;UBERON:0001048,1.66e-08,160;UBERON:0004211,2.80e-07,15;UBERON:0009773,2.80e-07,15;UBERON:0001231,2.80e-07,15;UBERON:0001285,2.80e-07,15;UBERON:0007684,2.80e-07,15;UBERON:0004208,2.80e-07,15;UBERON:0001851,2.88e-07,15;UBERON:0002417,5.34e-07,60;UBERON:0000916,5.34e-07,60;UBERON:0006554,5.37e-07,47;UBERON:0006555,6.81e-07,16;UBERON:0004819,6.81e-07,16 | |||
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| ||
|short_description=p1@EIF4G1 | |short_description=p1@EIF4G1 | ||
}} | }} |
Latest revision as of 01:50, 17 September 2015
Short description: | p1@EIF4G1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EIF4G1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000350481, ENST00000382330, ENST00000392537, ENST00000413967, ENST00000421110, ENST00000426123, ENST00000440448, ENST00000442406, ENST00000444134, ENST00000450424, ENST00000455679, ENST00000485712, uc003fno.1, uc003fnp.2, uc003fnq.2, uc003fnr.2, uc003fns.2, uc003fnt.2, uc010hxw.1, uc010hxx.2, uc010hxy.2_5end |
EntrezGene: | EIF4G1 |
HGNC: | 3296 |
UniProt: | E9PFM1F8WB97C9K073C9JF13C9JWH9F8WCF2C9JWH7C9J2Z7C9JIH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.69e-29 | 253 |
embryonic cell | 2.52e-20 | 250 |
squamous epithelial cell | 7.88e-12 | 63 |
mesodermal cell | 2.17e-08 | 121 |
endodermal cell | 8.79e-08 | 58 |
epithelial cell of nephron | 2.80e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.26e-14 | 199 |
trunk region element | 2.02e-12 | 101 |
epithelial tube | 1.07e-11 | 117 |
subdivision of trunk | 3.02e-10 | 112 |
unilaminar epithelium | 4.30e-09 | 148 |
abdomen element | 5.67e-09 | 54 |
abdominal segment element | 5.67e-09 | 54 |
mesenchyme | 5.74e-09 | 160 |
entire embryonic mesenchyme | 5.74e-09 | 160 |
trunk mesenchyme | 1.07e-08 | 122 |
primordium | 1.66e-08 | 160 |
nephron epithelium | 2.80e-07 | 15 |
renal tubule | 2.80e-07 | 15 |
nephron tubule | 2.80e-07 | 15 |
nephron | 2.80e-07 | 15 |
uriniferous tubule | 2.80e-07 | 15 |
nephrogenic mesenchyme | 2.80e-07 | 15 |
cortex | 2.88e-07 | 15 |
abdominal segment of trunk | 5.34e-07 | 60 |
abdomen | 5.34e-07 | 60 |
urinary system structure | 5.37e-07 | 47 |
excretory tube | 6.81e-07 | 16 |
kidney epithelium | 6.81e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.41e-12 | 235 |
disease of cellular proliferation | 1.40e-11 | 239 |
carcinoma | 4.79e-08 | 106 |
cell type cancer | 1.54e-07 | 143 |