FFCP PHASE1:Hg19::chr3:195538833..195538847,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4585 | |EntrezGene=4585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7514 | |HGNC=7514 | ||
|TSSclassifier=strong | |||
|UniProt=A0T3F4,Q99102,E9PDY6 | |UniProt=A0T3F4,Q99102,E9PDY6 | ||
|association_with_transcript=0bp_to_ENST00000478685,NM_004532,NM_018406,NM_138297_5end | |association_with_transcript=0bp_to_ENST00000478685,NM_004532,NM_018406,NM_138297_5end | ||
|cluster_id=chr3:195538833..195538847,- | |||
|coexpression_cluster_id=C1270 | |||
|description=CAGE_peak_4_at_MUC4_5end | |description=CAGE_peak_4_at_MUC4_5end | ||
|id=chr3:195538833..195538847,- | |id=chr3:195538833..195538847,- | ||
|ontology_enrichment_celltype=CL:0000039!5.45e-13!7;CL:0000586!5.45e-13!7 | |ontology_enrichment_celltype=CL:0000039!5.45e-13!7;CL:0000586!5.45e-13!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.87e-12;7!CL:0000586;2.87e-12;7!CL:1000415;3.09e-12;2!CL:0002536;1.75e-11;2!CL:1001319;7.59e-07;1!CL:1000600;7.59e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.83e-12,7;CL:0000586,2.83e-12,7;CL:1000415,3.18e-12,2;CL:0002536,1.11e-11,2;CL:1001319,7.60e-07,1;CL:1000600,7.60e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.42e-07!22;DOID:2994!1.42e-07!22;DOID:305!6.53e-07!106 | |ontology_enrichment_disease=DOID:3095!1.42e-07!22;DOID:2994!1.42e-07!22;DOID:305!6.53e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.46e-11,106;DOID:0050687,2.47e-09,143;DOID:3111,9.48e-07,1;DOID:3603,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.66e-12!104;UBERON:0000466!7.87e-12!126;UBERON:0004921!1.93e-10!129;UBERON:0004185!1.93e-10!129;UBERON:0007023!7.14e-10!115;UBERON:0001007!9.17e-10!155;UBERON:0001555!9.17e-10!155;UBERON:0007026!9.17e-10!155;UBERON:0004119!1.10e-09!169;UBERON:0000925!1.10e-09!169;UBERON:0006595!1.10e-09!169;UBERON:0002294!1.80e-09!7;UBERON:0001173!1.80e-09!7;UBERON:0004912!1.80e-09!7;UBERON:0000077!1.89e-09!130;UBERON:0002553!5.09e-09!70;UBERON:0003135!1.46e-07!11;UBERON:0000058!1.63e-07!26;UBERON:0000473!1.90e-07!8;UBERON:0003886!3.12e-07!63 | |ontology_enrichment_uberon=UBERON:0000464!1.66e-12!104;UBERON:0000466!7.87e-12!126;UBERON:0004921!1.93e-10!129;UBERON:0004185!1.93e-10!129;UBERON:0007023!7.14e-10!115;UBERON:0001007!9.17e-10!155;UBERON:0001555!9.17e-10!155;UBERON:0007026!9.17e-10!155;UBERON:0004119!1.10e-09!169;UBERON:0000925!1.10e-09!169;UBERON:0006595!1.10e-09!169;UBERON:0002294!1.80e-09!7;UBERON:0001173!1.80e-09!7;UBERON:0004912!1.80e-09!7;UBERON:0000077!1.89e-09!130;UBERON:0002553!5.09e-09!70;UBERON:0003135!1.46e-07!11;UBERON:0000058!1.63e-07!26;UBERON:0000473!1.90e-07!8;UBERON:0003886!3.12e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;7.91e-13;7!UBERON:0001173;7.91e-13;7!UBERON:0006562;2.77e-12;2!UBERON:0000059;6.45e-12;11!UBERON:0000341;7.63e-12;2!UBERON:0003127;8.97e-12;2!UBERON:0000160;3.07e-10;17!UBERON:0001155;9.78e-10;9!UBERON:0002110;1.96e-08;3!UBERON:0004921;6.58e-08;33!UBERON:0005409;6.98e-08;22!UBERON:0004913;4.09e-07;1!UBERON:0003703;4.09e-07;1!UBERON:0001174;4.09e-07;1!UBERON:0004914;4.09e-07;1!UBERON:0002372;4.85e-07;1!UBERON:0001961;4.85e-07;1!UBERON:0001744;4.85e-07;1!UBERON:0001042;4.85e-07;1!UBERON:0001735;4.85e-07;1!UBERON:0000997;5.90e-07;1!UBERON:0005056;5.90e-07;1!UBERON:0004176;5.90e-07;1!UBERON:0004645;7.59e-07;1!UBERON:0001256;7.59e-07;1!UBERON:0001259;7.59e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,5.42e-12,11;UBERON:0000341,8.06e-12,2;UBERON:0003127,1.11e-11,2;UBERON:0000160,2.71e-10,17;UBERON:0002294,4.61e-10,9;UBERON:0001173,4.61e-10,9;UBERON:0004912,4.61e-10,9;UBERON:0001155,8.83e-10,9;UBERON:0004921,2.40e-09,118;UBERON:0001007,3.70e-09,145;UBERON:0001555,3.70e-09,145;UBERON:0007026,3.70e-09,145;UBERON:0002110,1.99e-08,3;UBERON:0006242,1.99e-08,3;UBERON:0004119,6.24e-08,160;UBERON:0000925,6.24e-08,160;UBERON:0006595,6.24e-08,160;UBERON:0004913,4.09e-07,1;UBERON:0003703,4.09e-07,1;UBERON:0001174,4.09e-07,1;UBERON:0004914,4.09e-07,1;UBERON:0002372,4.85e-07,1;UBERON:0001961,4.85e-07,1;UBERON:0001744,4.85e-07,1;UBERON:0001735,4.85e-07,1;UBERON:0000997,6.08e-07,1;UBERON:0005056,6.08e-07,1;UBERON:0005409,6.12e-07,25;UBERON:0004645,7.60e-07,1;UBERON:0001256,7.60e-07,1;UBERON:0001259,7.60e-07,1;UBERON:0001154,8.97e-07,1;UBERON:0001153,8.97e-07,1;UBERON:0001045,8.97e-07,1 | |||
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| ||
|short_description=p4@MUC4 | |short_description=p4@MUC4 | ||
}} | }} |
Latest revision as of 14:33, 17 September 2015
Short description: | p4@MUC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MUC4_5end |
Coexpression cluster: | C1270_papillotubular_gall_epidermoid_mucinous_trachea_throat_colon |
Association with transcript: | 0bp_to_ENST00000478685, NM_004532, NM_018406, NM_138297_5end |
EntrezGene: | MUC4 |
HGNC: | 7514 |
UniProt: | A0T3F4Q99102E9PDY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.83e-12 | 7 |
germ cell | 2.83e-12 | 7 |
epithelial cell of gall bladder | 3.18e-12 | 2 |
amniotic epithelial cell | 1.11e-11 | 2 |
bladder cell | 7.60e-07 | 1 |
lower urinary tract cell | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
large intestine | 5.42e-12 | 11 |
throat | 8.06e-12 | 2 |
open tracheal system trachea | 1.11e-11 | 2 |
intestine | 2.71e-10 | 17 |
biliary system | 4.61e-10 | 9 |
biliary tree | 4.61e-10 | 9 |
biliary bud | 4.61e-10 | 9 |
colon | 8.83e-10 | 9 |
subdivision of digestive tract | 2.40e-09 | 118 |
digestive system | 3.70e-09 | 145 |
digestive tract | 3.70e-09 | 145 |
primitive gut | 3.70e-09 | 145 |
gallbladder | 1.99e-08 | 3 |
gall bladder primordium | 1.99e-08 | 3 |
endoderm-derived structure | 6.24e-08 | 160 |
endoderm | 6.24e-08 | 160 |
presumptive endoderm | 6.24e-08 | 160 |
hepatopancreatic ampulla | 4.09e-07 | 1 |
extrahepatic bile duct | 4.09e-07 | 1 |
common bile duct | 4.09e-07 | 1 |
duodenal papilla | 4.09e-07 | 1 |
tonsil | 4.85e-07 | 1 |
mucosa-associated lymphoid tissue | 4.85e-07 | 1 |
lymphoid tissue | 4.85e-07 | 1 |
tonsillar ring | 4.85e-07 | 1 |
mammalian vulva | 6.08e-07 | 1 |
external female genitalia | 6.08e-07 | 1 |
gastrointestinal system | 6.12e-07 | 25 |
urinary bladder urothelium | 7.60e-07 | 1 |
wall of urinary bladder | 7.60e-07 | 1 |
mucosa of urinary bladder | 7.60e-07 | 1 |
vermiform appendix | 8.97e-07 | 1 |
caecum | 8.97e-07 | 1 |
midgut | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.46e-11 | 106 |
cell type cancer | 2.47e-09 | 143 |
cystadenocarcinoma | 9.48e-07 | 1 |
mucinous cystadenocarcinoma | 9.48e-07 | 1 |