FFCP PHASE1:Hg19::chr3:50230292..50230317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2779 | |EntrezGene=2779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4393 | |HGNC=4393 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_ENST00000467787_5end | |association_with_transcript=161bp_to_ENST00000467787_5end | ||
|cluster_id=chr3:50230292..50230317,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_GNAT1_5end | |description=CAGE_peak_2_at_GNAT1_5end | ||
|id=chr3:50230292..50230317,+ | |id=chr3:50230292..50230317,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.27e-23;3!UBERON:0004161;2.63e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!3.59e-26!2;UBERON:0002757!3.59e-26!2;UBERON:0010134!3.59e-26!2;UBERON:0002784!3.59e-26!2;UBERON:0005408!3.59e-26!2;UBERON:0001899!3.59e-26!2;UBERON:0001896!3.78e-17!3;UBERON:0005290!3.78e-17!3;UBERON:0010096!3.78e-17!3;UBERON:0003296!1.34e-13!4;UBERON:0010133!1.34e-13!4;UBERON:0001049!7.70e-13!57;UBERON:0005068!7.70e-13!57;UBERON:0006241!7.70e-13!57;UBERON:0007135!7.70e-13!57;UBERON:0003075!1.54e-10!86;UBERON:0007284!1.54e-10!86;UBERON:0005743!2.08e-10!86;UBERON:0002346!4.97e-10!90;UBERON:0002616!1.70e-09!59;UBERON:0000073!2.41e-09!94;UBERON:0001016!2.41e-09!94;UBERON:0001017!1.30e-08!82;UBERON:0001894!3.70e-08!7;UBERON:0006222!3.70e-08!7;UBERON:0003076!5.65e-08!15;UBERON:0003057!5.65e-08!15;UBERON:0000955!6.24e-08!69;UBERON:0006238!6.24e-08!69;UBERON:0007023!1.05e-07!115;UBERON:0002780!2.45e-07!41;UBERON:0001890!2.45e-07!41;UBERON:0006240!2.45e-07!41;UBERON:0003080!3.65e-07!42;UBERON:0002298!5.30e-07!8;UBERON:0003056!6.56e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.60e-14;5!UBERON:0005388;1.60e-14;5!UBERON:0001802;1.60e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24 | |||
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|short_description=p2@GNAT1 | |short_description=p2@GNAT1 | ||
}} | }} |
Latest revision as of 18:39, 18 September 2015
Short description: | p2@GNAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNAT1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 161bp_to_ENST00000467787_5end |
EntrezGene: | GNAT1 |
HGNC: | 4393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |