FFCP PHASE1:Hg19::chr4:147867025..147867049,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83894 | |EntrezGene=83894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29936 | |HGNC=29936 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NA56,D6RJF6,E7EQ14,Q8TC83,A8MUB8 | |UniProt=Q8NA56,D6RJF6,E7EQ14,Q8TC83,A8MUB8 | ||
|association_with_transcript=0bp_to_ENST00000325106,ENST00000502319,ENST00000504425,NM_031956,uc003ikw.3,uc003ikx.3,uc010ipc.2,uc010ipd.1_5end | |association_with_transcript=0bp_to_ENST00000325106,ENST00000502319,ENST00000504425,NM_031956,uc003ikw.3,uc003ikx.3,uc010ipc.2,uc010ipd.1_5end | ||
|cluster_id=chr4:147867025..147867049,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_TTC29_5end | |description=CAGE_peak_3_at_TTC29_5end | ||
|id=chr4:147867025..147867049,- | |id=chr4:147867025..147867049,- | ||
|ontology_enrichment_celltype=CL:0002274!1.27e-08!5;CL:0000457!1.27e-08!5;CL:0002191!1.27e-08!5;CL:0000097!1.27e-08!5;CL:0000831!1.27e-08!5;CL:0002028!1.27e-08!5 | |ontology_enrichment_celltype=CL:0002274!1.27e-08!5;CL:0000457!1.27e-08!5;CL:0002191!1.27e-08!5;CL:0000097!1.27e-08!5;CL:0000831!1.27e-08!5;CL:0002028!1.27e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.29e-20;5!CL:0000228;2.91e-12;1!CL:0002372;2.91e-12;1!CL:0000163;9.96e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.55e-21,5;CL:0002028,9.55e-21,5;CL:0000228,2.20e-12,1;CL:0002372,2.20e-12,1;CL:0000163,8.45e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.27e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;2.91e-12;1!DOID:3910;4.82e-07;2!DOID:4468;6.80e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,2.75e-12,1;DOID:3910,4.83e-07,2;DOID:4468,6.80e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.72e-18!57;UBERON:0005068!7.72e-18!57;UBERON:0006241!7.72e-18!57;UBERON:0007135!7.72e-18!57;UBERON:0002780!3.24e-16!41;UBERON:0001890!3.24e-16!41;UBERON:0006240!3.24e-16!41;UBERON:0003080!1.21e-15!42;UBERON:0002616!1.37e-15!59;UBERON:0000955!1.50e-13!69;UBERON:0006238!1.50e-13!69;UBERON:0003075!2.24e-13!86;UBERON:0007284!2.24e-13!86;UBERON:0002346!3.99e-13!90;UBERON:0003056!6.25e-13!61;UBERON:0002020!8.42e-13!34;UBERON:0003528!8.42e-13!34;UBERON:0002619!1.04e-12!22;UBERON:0001893!1.05e-12!34;UBERON:0001869!1.45e-12!32;UBERON:0000073!5.17e-12!94;UBERON:0001016!5.17e-12!94;UBERON:0002791!7.31e-12!33;UBERON:0001017!1.07e-11!82;UBERON:0005743!1.62e-11!86;UBERON:0007023!2.18e-11!115;UBERON:0000956!1.11e-10!25;UBERON:0000203!1.11e-10!25;UBERON:0001950!1.41e-10!20;UBERON:0000025!1.33e-07!194;UBERON:0000033!1.36e-07!123;UBERON:0000153!2.12e-07!129;UBERON:0007811!2.12e-07!129;UBERON:0000119!2.39e-07!312;UBERON:0000483!7.16e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!7.72e-18!57;UBERON:0005068!7.72e-18!57;UBERON:0006241!7.72e-18!57;UBERON:0007135!7.72e-18!57;UBERON:0002780!3.24e-16!41;UBERON:0001890!3.24e-16!41;UBERON:0006240!3.24e-16!41;UBERON:0003080!1.21e-15!42;UBERON:0002616!1.37e-15!59;UBERON:0000955!1.50e-13!69;UBERON:0006238!1.50e-13!69;UBERON:0003075!2.24e-13!86;UBERON:0007284!2.24e-13!86;UBERON:0002346!3.99e-13!90;UBERON:0003056!6.25e-13!61;UBERON:0002020!8.42e-13!34;UBERON:0003528!8.42e-13!34;UBERON:0002619!1.04e-12!22;UBERON:0001893!1.05e-12!34;UBERON:0001869!1.45e-12!32;UBERON:0000073!5.17e-12!94;UBERON:0001016!5.17e-12!94;UBERON:0002791!7.31e-12!33;UBERON:0001017!1.07e-11!82;UBERON:0005743!1.62e-11!86;UBERON:0007023!2.18e-11!115;UBERON:0000956!1.11e-10!25;UBERON:0000203!1.11e-10!25;UBERON:0001950!1.41e-10!20;UBERON:0000025!1.33e-07!194;UBERON:0000033!1.36e-07!123;UBERON:0000153!2.12e-07!129;UBERON:0007811!2.12e-07!129;UBERON:0000119!2.39e-07!312;UBERON:0000483!7.16e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.91e-12;1!UBERON:0002171;2.91e-12;1!UBERON:0006518;2.91e-12;1!UBERON:0008949;2.91e-12;1!UBERON:0000101;2.91e-12;1!UBERON:0002167;2.91e-12;1!UBERON:0003135;8.22e-10;11!UBERON:0004903;4.82e-07;2!UBERON:0002173;4.82e-07;2!UBERON:0002186;4.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.08e-12,1;UBERON:0006518,3.08e-12,1;UBERON:0008949,3.08e-12,1;UBERON:0000101,3.08e-12,1;UBERON:0002167,3.08e-12,1;UBERON:0001301,3.45e-12,1;UBERON:0003135,8.60e-10,11;UBERON:0004903,4.83e-07,2;UBERON:0002173,4.83e-07,2;UBERON:0002186,4.83e-07,2 | |||
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| ||
|short_description=p3@TTC29 | |short_description=p3@TTC29 | ||
}} | }} |
Latest revision as of 23:56, 15 September 2015
Short description: | p3@TTC29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTC29_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000325106, ENST00000502319, ENST00000504425, NM_031956, uc003ikw.3, uc003ikx.3, uc010ipc.2, uc010ipd.1_5end |
EntrezGene: | TTC29 |
HGNC: | 29936 |
UniProt: | Q8NA56D6RJF6E7EQ14Q8TC83A8MUB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.55e-21 | 5 |
basophil mast progenitor cell | 9.55e-21 | 5 |
multinucleate cell | 2.20e-12 | 1 |
myotube | 2.20e-12 | 1 |
endocrine cell | 8.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.08e-12 | 1 |
right lung lobe | 3.08e-12 | 1 |
lower lobe of lung | 3.08e-12 | 1 |
lobe of lung | 3.08e-12 | 1 |
right lung | 3.08e-12 | 1 |
epididymis | 3.45e-12 | 1 |
male reproductive organ | 8.60e-10 | 11 |
bronchoalveolar duct junction | 4.83e-07 | 2 |
alveolar duct | 4.83e-07 | 2 |
bronchiole | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 2.75e-12 | 1 |
lung adenocarcinoma | 4.83e-07 | 2 |
clear cell adenocarcinoma | 6.80e-07 | 2 |