FFCP PHASE1:Hg19::chr4:148885940..148885946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:148885940..148885946,+ | |||
|description=CAGE_peak_at_chr4:148885940..148885946,+ | |description=CAGE_peak_at_chr4:148885940..148885946,+ | ||
|id=chr4:148885940..148885946,+ | |id=chr4:148885940..148885946,+ | ||
|ontology_enrichment_celltype=CL:0002504!8.96e-20!3;CL:1000279!8.96e-20!3;CL:1000280!8.96e-20!3;CL:0002195!2.49e-13!2;CL:0002571!2.49e-13!2;CL:0002622!3.52e-09!3;CL:0002599!7.50e-08!1 | |ontology_enrichment_celltype=CL:0002504!8.96e-20!3;CL:1000279!8.96e-20!3;CL:1000280!8.96e-20!3;CL:0002195!2.49e-13!2;CL:0002571!2.49e-13!2;CL:0002622!3.52e-09!3;CL:0002599!7.50e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002599;2.37e-29;1!CL:1000487;2.05e-15;2!CL:0002504;9.90e-11;3!CL:1000279;9.90e-11;3!CL:1000280;9.90e-11;3!CL:0002622;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002599,1.33e-29,1;CL:1000487,2.74e-15,2;CL:0002622,8.99e-11,3;CL:0002504,9.90e-11,3;CL:1000279,9.90e-11,3;CL:1000280,9.90e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3307!5.51e-14!2 | |||
|ontology_enrichment_disease_v019=DOID:3307;2.69e-57;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.58e-57,2 | |||
|ontology_enrichment_uberon=UBERON:0002771!1.63e-18!3;UBERON:0000200!5.31e-16!6;UBERON:0001871!3.65e-12!7;UBERON:0001155!2.67e-11!9;UBERON:0001869!2.26e-10!32;UBERON:0001135!3.17e-10!15;UBERON:0007023!5.17e-10!115;UBERON:0001950!8.39e-10!20;UBERON:0001893!1.02e-09!34;UBERON:0000059!2.90e-09!11;UBERON:0002619!6.65e-09!22;UBERON:0002780!6.56e-08!41;UBERON:0001890!6.56e-08!41;UBERON:0006240!6.56e-08!41;UBERON:0000956!8.19e-08!25;UBERON:0000203!8.19e-08!25;UBERON:0003056!8.19e-08!61;UBERON:0002791!9.09e-08!33;UBERON:0003080!1.06e-07!42;UBERON:0002020!1.60e-07!34;UBERON:0003528!1.60e-07!34;UBERON:0002022!1.83e-07!1;UBERON:0003112!1.95e-07!1;UBERON:0000032!1.95e-07!1;UBERON:0005253!1.95e-07!1;UBERON:0003128!1.95e-07!1;UBERON:0002241!1.95e-07!1;UBERON:0001703!1.95e-07!1;UBERON:0004761!1.95e-07!1;UBERON:0009617!1.95e-07!1;UBERON:0000160!2.14e-07!27;UBERON:0006834!2.83e-07!1;UBERON:0001043!2.92e-07!4;UBERON:0009143!2.92e-07!4;UBERON:0007190!4.34e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0001049!6.61e-07!57;UBERON:0005068!6.61e-07!57;UBERON:0006241!6.61e-07!57;UBERON:0007135!6.61e-07!57 | |ontology_enrichment_uberon=UBERON:0002771!1.63e-18!3;UBERON:0000200!5.31e-16!6;UBERON:0001871!3.65e-12!7;UBERON:0001155!2.67e-11!9;UBERON:0001869!2.26e-10!32;UBERON:0001135!3.17e-10!15;UBERON:0007023!5.17e-10!115;UBERON:0001950!8.39e-10!20;UBERON:0001893!1.02e-09!34;UBERON:0000059!2.90e-09!11;UBERON:0002619!6.65e-09!22;UBERON:0002780!6.56e-08!41;UBERON:0001890!6.56e-08!41;UBERON:0006240!6.56e-08!41;UBERON:0000956!8.19e-08!25;UBERON:0000203!8.19e-08!25;UBERON:0003056!8.19e-08!61;UBERON:0002791!9.09e-08!33;UBERON:0003080!1.06e-07!42;UBERON:0002020!1.60e-07!34;UBERON:0003528!1.60e-07!34;UBERON:0002022!1.83e-07!1;UBERON:0003112!1.95e-07!1;UBERON:0000032!1.95e-07!1;UBERON:0005253!1.95e-07!1;UBERON:0003128!1.95e-07!1;UBERON:0002241!1.95e-07!1;UBERON:0001703!1.95e-07!1;UBERON:0004761!1.95e-07!1;UBERON:0009617!1.95e-07!1;UBERON:0000160!2.14e-07!27;UBERON:0006834!2.83e-07!1;UBERON:0001043!2.92e-07!4;UBERON:0009143!2.92e-07!4;UBERON:0007190!4.34e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0001049!6.61e-07!57;UBERON:0005068!6.61e-07!57;UBERON:0006241!6.61e-07!57;UBERON:0007135!6.61e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.98e-11;11!UBERON:0010147;2.98e-11;11!UBERON:0001043;9.90e-11;3!UBERON:0003937;2.13e-10;12!UBERON:0005399;2.13e-10;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,3.14e-11,11;UBERON:0010147,3.14e-11,11;UBERON:0009846,3.14e-11,11;UBERON:0003353,3.14e-11,11;UBERON:0004902,3.14e-11,11;UBERON:0003820,3.14e-11,11;UBERON:0009847,3.14e-11,11;UBERON:0001043,8.17e-11,3;UBERON:0009143,8.17e-11,3;UBERON:0003937,2.24e-10,12;UBERON:0005399,2.24e-10,12;UBERON:0000162,4.95e-09,14;UBERON:0001353,4.95e-09,14;UBERON:0000163,4.95e-09,14;UBERON:0006866,4.95e-09,14;UBERON:0000164,4.95e-09,14;UBERON:0000931,4.95e-09,14;UBERON:0004122,1.71e-08,15;UBERON:0001046,6.77e-07,19 | |||
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|short_description=p@chr4:148885940..148885946,+ | |short_description=p@chr4:148885940..148885946,+ | ||
}} | }} |
Latest revision as of 02:08, 30 July 2015
Short description: | p@chr4:148885940..148885946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:148885940..148885946, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the esophagus | 1.33e-29 | 1 |
smooth muscle cell of prostate | 2.74e-15 | 2 |
prostate stromal cell | 8.99e-11 | 3 |
enteric smooth muscle cell | 9.90e-11 | 3 |
smooth muscle cell of large intestine | 9.90e-11 | 3 |
smooth muscle cell of colon | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 3.14e-11 | 11 |
male accessory sex gland | 3.14e-11 | 11 |
embryonic cloacal epithelium | 3.14e-11 | 11 |
epithelium of hindgut | 3.14e-11 | 11 |
urogenital sinus epithelium | 3.14e-11 | 11 |
prostate bud | 3.14e-11 | 11 |
prostate field | 3.14e-11 | 11 |
esophagus | 8.17e-11 | 3 |
esophageal region | 8.17e-11 | 3 |
sex gland | 2.24e-10 | 12 |
male reproductive gland | 2.24e-10 | 12 |
cloaca | 4.95e-09 | 14 |
anal region | 4.95e-09 | 14 |
embryonic cloaca | 4.95e-09 | 14 |
terminal part of digestive tract | 4.95e-09 | 14 |
primitive urogenital sinus | 4.95e-09 | 14 |
proctodeum | 4.95e-09 | 14 |
genitourinary system | 1.71e-08 | 15 |
hindgut | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.58e-57 | 2 |