FFCP PHASE1:Hg19::chr5:121400333..121400344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121400333..121400344,- | |||
|description=CAGE_peak_at_chr5:121400333..121400344,- | |description=CAGE_peak_at_chr5:121400333..121400344,- | ||
|id=chr5:121400333..121400344,- | |id=chr5:121400333..121400344,- | ||
|ontology_enrichment_celltype=CL:0000057!5.35e-12!75;CL:0000055!3.53e-11!180;CL:0002334!1.93e-10!12 | |ontology_enrichment_celltype=CL:0000057!5.35e-12!75;CL:0000055!3.53e-11!180;CL:0002334!1.93e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000135;9.06e-21;3!CL:0000388;9.06e-21;3!CL:0000499;8.70e-08;28!CL:0000511;1.39e-07;1!CL:0002625;1.39e-07;1!CL:0002581;1.39e-07;1!CL:0000216;1.39e-07;1!CL:0002591;1.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.16e-21,3;CL:0000388,9.16e-21,3;CL:0000057,1.00e-09,76;CL:0000499,6.46e-08,28;CL:0000511,8.28e-08,1;CL:0002625,8.28e-08,1;CL:0000216,8.28e-08,1;CL:0002581,1.01e-07,1;CL:0002591,2.17e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;1.73e-13;2!DOID:4235;5.38e-08;1!DOID:6193;1.39e-07;1!DOID:3571;1.39e-07;1!DOID:2394;2.60e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,4.54e-14,2;DOID:4235,5.22e-08,1;DOID:3571,6.37e-08,1;DOID:6193,7.76e-08,1;DOID:2394,3.72e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.06e-21;3!UBERON:0000043;9.06e-21;3!UBERON:0007845;9.06e-21;3!UBERON:0001136;1.39e-07;1!UBERON:0001343;1.39e-07;1!UBERON:0004910;1.39e-07;1!UBERON:0004813;1.39e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.16e-21,3;UBERON:0000043,9.16e-21,3;UBERON:0007845,9.16e-21,3;UBERON:0001136,8.28e-08,1;UBERON:0001343,8.28e-08,1;UBERON:0004910,8.28e-08,1;UBERON:0005154,8.28e-08,1;UBERON:0005295,8.28e-08,1;UBERON:0004813,8.28e-08,1;UBERON:0005297,8.28e-08,1;UBERON:0005294,8.28e-08,1;UBERON:0010141,8.28e-08,1;UBERON:0005891,8.28e-08,1 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,1.30361867064741,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.662045904066094,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.448346041655403,0,0,0,0.408308342509787,0,0,1.18800285728205,1.7308685049499,0,0,0,0.125118519871964,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0,0.85422955527427,0.423863802319124,0,0,0,0.558350568994769,1.35021065793013,0,0,1.01254888506529,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0.301439377059586,0,1.79951384127703,0,0,0,1.4377491329495,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.831883446123229,1.60586089917446,0.788512075169673,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0.561320188866147,0.896974044789907,0,2.2519548960105,1.48418066444991,0.154209693802656,1.06537035187876,0.410635780069046,0,0.232420756919918,0,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0.4046311234222,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,1.89996871767898,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.457680136793847,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0.155262956876259,1.24411862352257,1.32920857278997,1.04349012362347,0.150257608997218,1.14241563650639,0,0,0.214821114084977,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0.694567422971502,0,0.179088841081487,0,0,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32391530883477,3.69740502905135,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,1.12131862580613,0.12729431655633,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.908391896352783,1.2846031433459,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,1.30361867064741,0,0,0.0945348171640679,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0.662045904066094,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.448346041655403,0,0,0,0.408308342509787,0,0,1.18800285728205,1.7308685049499,0,0,0,0.125118519871964,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0,0.85422955527427,0.423863802319124,0,0,0,0.558350568994769,1.35021065793013,0,0,1.01254888506529,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0.301439377059586,0,1.79951384127703,0,0,0,1.4377491329495,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.831883446123229,1.60586089917446,0.788512075169673,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0.561320188866147,0.896974044789907,0,2.2519548960105,1.48418066444991,0.154209693802656,1.06537035187876,0.410635780069046,0,0.232420756919918,0,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0,0.4046311234222,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,1.89996871767898,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0.554805861502613,0.378806010550178,0.251567901752575,0.889811221596536,0.457680136793847,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0.155262956876259,1.24411862352257,1.32920857278997,1.04349012362347,0.150257608997218,1.14241563650639,0,0,0.214821114084977,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0.694567422971502,0,0.179088841081487,0,0,0.883445729729405,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,1.41193548092464,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32391530883477,3.69740502905135,3.46101249699031,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,1.12131862580613,0.12729431655633,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:121400333..121400344,- | |short_description=p@chr5:121400333..121400344,- | ||
}} | }} |
Latest revision as of 09:06, 30 July 2015
Short description: | p@chr5:121400333..121400344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121400333..121400344, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.16e-21 | 3 |
tendon cell | 9.16e-21 | 3 |
fibroblast | 1.00e-09 | 76 |
stromal cell | 6.46e-08 | 28 |
androgen binding protein secreting cell | 8.28e-08 | 1 |
seminiferous tubule epithelial cell | 8.28e-08 | 1 |
Sertoli cell | 8.28e-08 | 1 |
perirenal preadipocyte | 1.01e-07 | 1 |
smooth muscle cell of the pulmonary artery | 2.17e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.16e-21 | 3 |
tendon | 9.16e-21 | 3 |
regular connective tissue | 9.16e-21 | 3 |
mesothelium | 8.28e-08 | 1 |
seminiferous tubule of testis | 8.28e-08 | 1 |
epithelium of male gonad | 8.28e-08 | 1 |
epithelial cord | 8.28e-08 | 1 |
sex cord | 8.28e-08 | 1 |
seminiferous tubule epithelium | 8.28e-08 | 1 |
testis sex cord | 8.28e-08 | 1 |
genital ridge | 8.28e-08 | 1 |
primitive sex cord of indifferent gonad | 8.28e-08 | 1 |
coelomic epithelium | 8.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 4.54e-14 | 2 |
spindle cell sarcoma | 5.22e-08 | 1 |
liver cancer | 6.37e-08 | 1 |
epithelioid sarcoma | 7.76e-08 | 1 |
ovarian cancer | 3.72e-07 | 14 |