FFCP PHASE1:Hg19::chr5:164028220..164028240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000519750_5end | |association_with_transcript=0bp_to_ENST00000519750_5end | ||
|cluster_id=chr5:164028220..164028240,+ | |||
|coexpression_cluster_id=C1404 | |||
|description=CAGE_peak_1_at_ENST00000519750_5end | |description=CAGE_peak_1_at_ENST00000519750_5end | ||
|id=chr5:164028220..164028240,+ | |id=chr5:164028220..164028240,+ | ||
|ontology_enrichment_celltype=CL:1000415!1.20e-08!2 | |ontology_enrichment_celltype=CL:1000415!1.20e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.24e-15;2!CL:0002178;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.15e-15,2;CL:0002178,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.37e-12;10!UBERON:0005564;2.37e-12;10!UBERON:0007123;5.38e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001282!9.99e-16!1;UBERON:0009842!9.99e-16!1;UBERON:0003704!9.99e-16!1;UBERON:0001171!9.99e-16!1;UBERON:0001172!9.99e-16!1;UBERON:0002294!3.04e-09!7;UBERON:0001173!3.04e-09!7;UBERON:0004912!3.04e-09!7;UBERON:0000473!3.77e-08!8 | |ontology_enrichment_uberon=UBERON:0001282!9.99e-16!1;UBERON:0009842!9.99e-16!1;UBERON:0003704!9.99e-16!1;UBERON:0001171!9.99e-16!1;UBERON:0001172!9.99e-16!1;UBERON:0002294!3.04e-09!7;UBERON:0001173!3.04e-09!7;UBERON:0004912!3.04e-09!7;UBERON:0000473!3.77e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.73e-29;1!UBERON:0009842;2.73e-29;1!UBERON:0003704;2.73e-29;1!UBERON:0001171;2.73e-29;1!UBERON:0001172;2.73e-29;1!UBERON:0002294;3.42e-17;7!UBERON:0001173;3.42e-17;7!UBERON:0000473;3.53e-15;8!UBERON:0003135;2.55e-11;11!UBERON:0002110;7.07e-11;3!UBERON:0001280;1.04e-10;3!UBERON:0004647;1.04e-10;3!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4!UBERON:0002046;5.38e-07;5!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.37e-29,1;UBERON:0009842,2.37e-29,1;UBERON:0003704,2.37e-29,1;UBERON:0001171,2.37e-29,1;UBERON:0001172,2.37e-29,1;UBERON:0000473,4.07e-15,8;UBERON:0002294,1.23e-13,9;UBERON:0001173,1.23e-13,9;UBERON:0004912,1.23e-13,9;UBERON:0003135,2.83e-11,11;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0001280,9.90e-11,3;UBERON:0004647,9.90e-11,3;UBERON:0005171,9.90e-11,3;UBERON:0002046,5.38e-07,5;UBERON:0004117,5.38e-07,5;UBERON:0007689,5.38e-07,5;UBERON:0007123,5.38e-07,5;UBERON:0003091,5.38e-07,5 | |||
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|short_description=p1@ENST00000519750 | |short_description=p1@ENST00000519750 | ||
}} | }} |
Latest revision as of 12:38, 30 July 2015
Short description: | p1@ENST00000519750 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000519750_5end |
Coexpression cluster: | C1404_gall_thyroid_testis_cholangiocellular_adult_acute_gastric |
Association with transcript: | 0bp_to_ENST00000519750_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.15e-15 | 2 |
epithelial cell of stomach | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.37e-29 | 1 |
acinus | 2.37e-29 | 1 |
intrahepatic bile duct | 2.37e-29 | 1 |
portal lobule | 2.37e-29 | 1 |
hepatic acinus | 2.37e-29 | 1 |
testis | 4.07e-15 | 8 |
biliary system | 1.23e-13 | 9 |
biliary tree | 1.23e-13 | 9 |
biliary bud | 1.23e-13 | 9 |
male reproductive organ | 2.83e-11 | 11 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
liver parenchyma | 9.90e-11 | 3 |
liver lobule | 9.90e-11 | 3 |
hepatic duct | 9.90e-11 | 3 |
thyroid gland | 5.38e-07 | 5 |
pharyngeal pouch | 5.38e-07 | 5 |
thyroid diverticulum | 5.38e-07 | 5 |
pharyngeal pouch 2 | 5.38e-07 | 5 |
thyroid primordium | 5.38e-07 | 5 |