FFCP PHASE1:Hg19::chr5:176895208..176895222,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:176895208..176895222,- | |||
|description=CAGE_peak_at_chr5:176895208..176895222,- | |description=CAGE_peak_at_chr5:176895208..176895222,- | ||
|id=chr5:176895208..176895222,- | |id=chr5:176895208..176895222,- | ||
|ontology_enrichment_celltype=CL:0000055!1.17e-17!180;CL:0002321!8.80e-17!248;CL:0000220!1.98e-16!246;CL:0000222!1.57e-13!119;CL:0000393!1.31e-10!60;CL:0000211!1.31e-10!60;CL:0000183!2.45e-10!59;CL:0000192!1.95e-08!42;CL:0000514!1.95e-08!42;CL:0000680!2.71e-08!57;CL:0000056!2.71e-08!57;CL:0000355!2.71e-08!57;CL:0000187!3.97e-08!54;CL:0000066!2.80e-07!254;CL:0000057!3.03e-07!75;CL:0000548!3.04e-07!679;CL:0000004!3.04e-07!679;CL:0000255!3.04e-07!679;CL:0000012!9.99e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.17e-17!180;CL:0002321!8.80e-17!248;CL:0000220!1.98e-16!246;CL:0000222!1.57e-13!119;CL:0000393!1.31e-10!60;CL:0000211!1.31e-10!60;CL:0000183!2.45e-10!59;CL:0000192!1.95e-08!42;CL:0000514!1.95e-08!42;CL:0000680!2.71e-08!57;CL:0000056!2.71e-08!57;CL:0000355!2.71e-08!57;CL:0000187!3.97e-08!54;CL:0000066!2.80e-07!254;CL:0000057!3.03e-07!75;CL:0000548!3.04e-07!679;CL:0000004!3.04e-07!679;CL:0000255!3.04e-07!679;CL:0000012!9.99e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.84e-09;15!CL:0002681;5.98e-08;12!CL:0002584;5.98e-08;12!CL:1000497;1.22e-07;17!CL:0002518;1.22e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.08e-09,15;CL:0002321,7.25e-09,250;CL:0000222,1.98e-08,121;CL:0002681,2.55e-08,12;CL:0002584,2.55e-08,12;CL:1000497,5.93e-08,17;CL:0002518,5.93e-08,17;CL:0000057,2.50e-07,76;CL:0002078,5.75e-07,45;CL:1000746,6.49e-07,7;CL:1000612,6.49e-07,7;CL:0000213,9.73e-07,58;CL:0000215,9.73e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.32e-13!79;UBERON:0007798!3.32e-13!79;UBERON:0000119!8.02e-11!312;UBERON:0000483!1.85e-10!309;UBERON:0000055!1.54e-09!69;UBERON:0001981!1.83e-09!60;UBERON:0007500!1.83e-09!60;UBERON:0004537!1.83e-09!60;UBERON:0006965!1.83e-09!60;UBERON:0005256!3.59e-09!143;UBERON:0003914!4.66e-09!118;UBERON:0000475!1.19e-08!365;UBERON:0001637!3.05e-08!42;UBERON:0003509!3.05e-08!42;UBERON:0004572!3.05e-08!42;UBERON:0000914!3.06e-08!83;UBERON:0002329!3.06e-08!83;UBERON:0003077!3.06e-08!83;UBERON:0003059!3.06e-08!83;UBERON:0007282!3.06e-08!83;UBERON:0009618!3.06e-08!83;UBERON:0007285!3.06e-08!83;UBERON:0004872!3.49e-08!84;UBERON:0000477!3.80e-08!286;UBERON:0000486!1.22e-07!82;UBERON:0004290!1.47e-07!70;UBERON:0000468!1.78e-07!659;UBERON:0000490!2.33e-07!138;UBERON:0002100!2.77e-07!216;UBERON:0000481!3.52e-07!347;UBERON:0004535!4.82e-07!110;UBERON:0001009!5.45e-07!113 | |ontology_enrichment_uberon=UBERON:0002049!3.32e-13!79;UBERON:0007798!3.32e-13!79;UBERON:0000119!8.02e-11!312;UBERON:0000483!1.85e-10!309;UBERON:0000055!1.54e-09!69;UBERON:0001981!1.83e-09!60;UBERON:0007500!1.83e-09!60;UBERON:0004537!1.83e-09!60;UBERON:0006965!1.83e-09!60;UBERON:0005256!3.59e-09!143;UBERON:0003914!4.66e-09!118;UBERON:0000475!1.19e-08!365;UBERON:0001637!3.05e-08!42;UBERON:0003509!3.05e-08!42;UBERON:0004572!3.05e-08!42;UBERON:0000914!3.06e-08!83;UBERON:0002329!3.06e-08!83;UBERON:0003077!3.06e-08!83;UBERON:0003059!3.06e-08!83;UBERON:0007282!3.06e-08!83;UBERON:0009618!3.06e-08!83;UBERON:0007285!3.06e-08!83;UBERON:0004872!3.49e-08!84;UBERON:0000477!3.80e-08!286;UBERON:0000486!1.22e-07!82;UBERON:0004290!1.47e-07!70;UBERON:0000468!1.78e-07!659;UBERON:0000490!2.33e-07!138;UBERON:0002100!2.77e-07!216;UBERON:0000481!3.52e-07!347;UBERON:0004535!4.82e-07!110;UBERON:0001009!5.45e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;3.54e-09;15!UBERON:0006555;4.84e-09;15!UBERON:0004819;4.84e-09;15!UBERON:0001285;4.84e-09;15!UBERON:0007684;4.84e-09;15!UBERON:0001225;5.98e-08;12!UBERON:0008987;5.98e-08;12 | |||
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|phase1_expression=0.908391896352783,0.856402095563933,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.89515962028049,0.261185628199839,0.737201809504527,3.48900583986214,2.18441372130172,0.791300934685361,0.495065411840187,1.32558950291166,2.6893005858071,0.602694528023977,2.92124036154949,0.487932798790507,1.60057375499824,3.26401105990805,2.5076377718247,0.572471974262113,2.05311637609326,1.25542639594803,0,0.0821005894499457,0.157421562627358,0.393364276848904,0,0,0.919421224478927,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0,0,0.579386075843295,0,0.973269740605272,1.22895262313288,3.99112915432615,1.75669571386252,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,3.4409383804245,1.38856200643038,0,0.419499436209906,4.12677062910101,0.835979866147242,0,0.71153252537342,0.66944122552934,1.61131726843659,0,1.22031028774085,0.367663080345869,3.24056779152704,0.535798369704479,1.57170560838319,0.450445921933289,0,0.949265659568129,1.46561395144326,0,0,0,0.496971951695318,1.2663051166458,0.264818361626438,1.43418310374407,0.354668382198357,3.92474320099615,0,1.72667283892012,0,0.942974704487816,1.14423332179421,0.605429710579726,1.72852777344,0,1.24864030732128,1.71141546463335,0.597794722207204,1.87895197830024,1.13311061057692,0.842704840213491,0,1.96534907698829,0.206651562351531,1.18800285728205,0.247266929278557,0,1.43723628363248,1.0100166837244,0.500474079487857,0,0.438977620880838,2.75839016219118,0.45071417671979,0.340296549480063,1.25572744982203,0.213557388818567,0.211931901159562,0.900273288253207,0.515262646192195,1.8034837803194,0.744467425326359,1.35021065793013,0.389748020644795,1.51460264546469,0.184099797284599,0.646584227275248,3.19508633264953,0.806016785821122,0.508681776931463,0,0,0.286804595389004,0.609868530647977,0.662648841607426,1.2781333715647,0.932949495138334,2.01856680700503,0.72995471815166,0,0.643240938192885,0,1.85747171212792,0,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0.217879444092406,0,0.134831308160164,0,0.38474715694639,1.4763109092493,8.41450642820675,0.4115740113314,5.88034845542168,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,0.768251997860379,0,0.201057944823262,0.0925884451585296,0,0,0,0.579652024875384,0.70445216541493,0.577465791044295,1.38895653772983,1.33177906564219,0.790204397959275,0,0,0,0,0,0.671928512795438,0.992425680696705,0.268675568108545,0,1.15014803749563,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0.285826432630578,0.224262168690721,1.30788020649984,0.5867062865676,0.129271715757778,0,0.845302752556,0.797814349754612,0,0.257207374262142,2.83698264046557,1.5985330740966,0.142977993658148,0.542621605391443,2.46972101034231,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0,0.499864955910285,0,0,0,0.239624855491583,3.44585807502342,0,0.434343920002738,1.02738161275192,0.179060963239896,0,0.197030760201927,0,0,0.508189248444927,0,3.09315525111078,0.837581326671744,4.46557126157214,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,1.03985430765404,2.49800584316026,0.630809660135739,0.117141414992713,0.300946099727719,0,1.03473071292505,0.664225598535437,0.921845842708516,0.347534457872331,1.56640925970192,3.43143423810856,0,0,0,0.606255142892519,4.99306318531491,1.81434175997808,0,1.68808170616869,2.52594084989766,0.384417447767103,0,1.12597744800525,0,1.07946785661859,1.59805552781814,0.0821271560138091,1.03850885836724,1.39452454151951,0.241718899183244,1.00253235151642,0.184161977871793,0.803701137152247,0.910455840033585,1.70461739447251,1.80479845162965,0.770153371044148,2.35304930753057,1.46139224653261,0.316654886678627,0,1.87103075804167,1.29549549661284,1.54227252690289,2.16757150035082,2.50844886927427,0,2.49322802678617,2.68649705666614,0,0,0.256450125116389,2.29610251989794,1.95227036798582,0.103041011647722,1.19040304263846,0.165018999841176,0,0,0,0.290012154876366,1.3864375540318,0.614014698904518,1.37836572484531,0.322260734604821,1.45016693914229,0.852266274161009,0.356128142586949,0.165284915360978,1.15314040419064,0.510450849978337,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,0.924100740528266,0,0.869932992075073,0.9266210955196,0.143124886741991,2.60510858551767,0.316379424718726,0.953150969619124,0.767693373934002,0.42793898803392,0.636406495851874,2.35484592059769,0.359744915166629,0.823611089208164,0.942499218765491,0.404364963146632,1.58510321173008,2.10629228119491,0.48763373908959,0.731140468893853,1.05650146756755,0.545999645631943,1.1312434556297,1.13008116620243,1.65409603063837,0,0.438450885253763,2.31510213706675,1.31178950409327,0.202910376962704,1.239293992399,1.97186921772569,0.430234056612155,0.196498082026242,0.7133421029625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| ||
|short_description=p@chr5:176895208..176895222,- | |short_description=p@chr5:176895208..176895222,- | ||
}} | }} |
Latest revision as of 13:38, 30 July 2015
Short description: | p@chr5:176895208..176895222, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:176895208..176895222, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.08e-09 | 15 |
embryonic cell | 7.25e-09 | 250 |
mesodermal cell | 1.98e-08 | 121 |
kidney cortical cell | 2.55e-08 | 12 |
renal cortical epithelial cell | 2.55e-08 | 12 |
kidney cell | 5.93e-08 | 17 |
kidney epithelial cell | 5.93e-08 | 17 |
fibroblast | 2.50e-07 | 76 |
meso-epithelial cell | 5.75e-07 | 45 |
glomerular cell | 6.49e-07 | 7 |
kidney corpuscule cell | 6.49e-07 | 7 |
lining cell | 9.73e-07 | 58 |
barrier cell | 9.73e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 1.46e-09 | 15 |
nephron epithelium | 2.08e-09 | 15 |
renal tubule | 2.08e-09 | 15 |
nephron tubule | 2.08e-09 | 15 |
nephron | 2.08e-09 | 15 |
uriniferous tubule | 2.08e-09 | 15 |
nephrogenic mesenchyme | 2.08e-09 | 15 |
excretory tube | 1.24e-08 | 16 |
kidney epithelium | 1.24e-08 | 16 |
cortex of kidney | 2.55e-08 | 12 |
renal parenchyma | 2.55e-08 | 12 |
vasculature | 3.02e-08 | 78 |
vascular system | 3.02e-08 | 78 |
epithelial tube | 6.01e-07 | 117 |
primitive nephron | 6.49e-07 | 7 |
renal glomerulus | 6.49e-07 | 7 |
renal corpuscle | 6.49e-07 | 7 |
glomerular capsule | 6.49e-07 | 7 |
metanephric mesenchyme | 6.49e-07 | 7 |
glomerular tuft | 6.49e-07 | 7 |
S-shaped body | 6.49e-07 | 7 |
renal vesicle | 6.49e-07 | 7 |
comma-shaped body | 6.49e-07 | 7 |