FFCP PHASE1:Hg19::chr5:36877128..36877133,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25836 | |EntrezGene=25836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28862 | |HGNC=28862 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=236bp_to_ENST00000448238_5end | |association_with_transcript=236bp_to_ENST00000448238_5end | ||
|cluster_id=chr5:36877128..36877133,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_16_at_NIPBL_5end | |description=CAGE_peak_16_at_NIPBL_5end | ||
|id=chr5:36877128..36877133,+ | |id=chr5:36877128..36877133,+ | ||
|ontology_enrichment_celltype=CL:0002031!1.22e-16!124;CL:0000738!1.33e-16!140;CL:0000037!9.41e-16!172;CL:0000566!9.41e-16!172;CL:0002032!1.17e-15!165;CL:0000837!1.17e-15!165;CL:0000557!4.13e-15!71;CL:0000988!2.69e-14!182;CL:0000839!3.96e-14!70;CL:0000763!1.25e-13!112;CL:0000049!1.25e-13!112;CL:0002009!1.35e-13!65;CL:0002087!3.94e-13!119;CL:0002057!1.71e-12!42;CL:0000766!3.22e-12!76;CL:0002194!5.14e-12!63;CL:0000576!5.14e-12!63;CL:0000040!5.14e-12!63;CL:0000559!5.14e-12!63;CL:0000860!5.55e-12!45;CL:0000451!1.38e-07!10;CL:0000990!1.45e-07!8 | |ontology_enrichment_celltype=CL:0002031!1.22e-16!124;CL:0000738!1.33e-16!140;CL:0000037!9.41e-16!172;CL:0000566!9.41e-16!172;CL:0002032!1.17e-15!165;CL:0000837!1.17e-15!165;CL:0000557!4.13e-15!71;CL:0000988!2.69e-14!182;CL:0000839!3.96e-14!70;CL:0000763!1.25e-13!112;CL:0000049!1.25e-13!112;CL:0002009!1.35e-13!65;CL:0002087!3.94e-13!119;CL:0002057!1.71e-12!42;CL:0000766!3.22e-12!76;CL:0002194!5.14e-12!63;CL:0000576!5.14e-12!63;CL:0000040!5.14e-12!63;CL:0000559!5.14e-12!63;CL:0000860!5.55e-12!45;CL:0000451!1.38e-07!10;CL:0000990!1.45e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.15e-21;2!CL:0001016;5.15e-21;2!CL:0002567;1.71e-14;3!CL:0000097;2.53e-09;5!CL:0000453;3.10e-09;5!CL:0000840;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.66e-21,2;CL:0001016,4.66e-21,2;CL:0002567,1.40e-14,3;CL:0000097,2.53e-09,5;CL:0002028,2.53e-09,5;CL:0000453,2.97e-09,5;CL:0000840,6.34e-08,5;CL:0001029,6.34e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.39e-12!86;UBERON:0004765!3.40e-12!101;UBERON:0001434!3.40e-12!101;UBERON:0002390!3.48e-12!102;UBERON:0003061!3.48e-12!102;UBERON:0002371!4.88e-12!80;UBERON:0002193!1.16e-10!112;UBERON:0002405!1.09e-09!115 | |ontology_enrichment_uberon=UBERON:0001474!1.39e-12!86;UBERON:0004765!3.40e-12!101;UBERON:0001434!3.40e-12!101;UBERON:0002390!3.48e-12!102;UBERON:0003061!3.48e-12!102;UBERON:0002371!4.88e-12!80;UBERON:0002193!1.16e-10!112;UBERON:0002405!1.09e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p16@NIPBL | |short_description=p16@NIPBL | ||
}} | }} |
Latest revision as of 19:46, 17 September 2015
Short description: | p16@NIPBL |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NIPBL_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 236bp_to_ENST00000448238_5end |
EntrezGene: | NIPBL |
HGNC: | 28862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.66e-21 | 2 |
immature CD1a-positive Langerhans cell | 4.66e-21 | 2 |
light melanocyte | 1.40e-14 | 3 |
mast cell | 2.53e-09 | 5 |
basophil mast progenitor cell | 2.53e-09 | 5 |
Langerhans cell | 2.97e-09 | 5 |
immature conventional dendritic cell | 6.34e-08 | 5 |
common dendritic progenitor | 6.34e-08 | 5 |