FFCP PHASE1:Hg19::chr15:60655224..60655230,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:60655224..60655230,-
|short_description=p@chr15:60655224..60655230,-
|description=CAGE_peak_at_chr15:60655224..60655230,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:60655224..60655230,- | |||
|description=CAGE_peak_at_chr15:60655224..60655230,- | |||
|id=chr15:60655224..60655230,- | |||
|ontology_enrichment_celltype=CL:0000860!9.45e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.78e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.05e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.77e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.97e-15;2!DOID:3369;6.24e-09;1!DOID:1799;1.77e-08;1!DOID:10165;1.77e-08;1!DOID:6193;1.77e-08;1!DOID:1798;1.77e-08;1!DOID:1749;1.84e-08;14!DOID:1324;6.65e-08;15!DOID:0050615;2.05e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.35e-15,2;DOID:0050687,1.01e-09,143;DOID:3369,5.59e-09,1;DOID:1799,1.18e-08,1;DOID:10165,1.18e-08,1;DOID:1798,1.18e-08,1;DOID:1749,1.71e-08,14;DOID:6193,3.79e-08,1;DOID:1324,4.88e-08,15;DOID:305,1.34e-07,106;DOID:0050615,1.53e-07,16;DOID:3908,9.43e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.97e-15;2!UBERON:0002173;2.97e-15;2!UBERON:0002186;2.97e-15;2!UBERON:0004821;1.78e-10;3!UBERON:0007499;1.78e-10;3!UBERON:0003215;1.78e-10;3!UBERON:0010368;1.78e-10;3!UBERON:0009911;1.78e-10;3!UBERON:0002299;1.78e-10;3!UBERON:0006524;1.78e-10;3!UBERON:0008874;1.78e-10;3!UBERON:0002169;1.78e-10;3!UBERON:0004894;1.78e-10;3!UBERON:0005795;1.77e-08;1!UBERON:0000997;1.77e-08;1!UBERON:0005056;1.77e-08;1!UBERON:0004176;1.77e-08;1!UBERON:0009856;4.53e-08;4!UBERON:0000058;5.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.35e-15,2;UBERON:0002173,1.35e-15,2;UBERON:0002186,1.35e-15,2;UBERON:0004821,1.05e-10,3;UBERON:0003215,1.05e-10,3;UBERON:0010368,1.05e-10,3;UBERON:0009911,1.05e-10,3;UBERON:0002299,1.05e-10,3;UBERON:0006524,1.05e-10,3;UBERON:0008874,1.05e-10,3;UBERON:0002169,1.05e-10,3;UBERON:0004894,1.05e-10,3;UBERON:0000997,1.37e-08,1;UBERON:0005056,1.37e-08,1 | |||
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| ||
|short_description=p@chr15:60655224..60655230,- | |||
}} | }} |
Latest revision as of 03:03, 25 July 2015
Short description: | p@chr15:60655224..60655230, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:60655224..60655230, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.05e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.35e-15 | 2 |
alveolar duct | 1.35e-15 | 2 |
bronchiole | 1.35e-15 | 2 |
pulmonary alveolus epithelium | 1.05e-10 | 3 |
alveolus | 1.05e-10 | 3 |
pulmonary lobule | 1.05e-10 | 3 |
lobule | 1.05e-10 | 3 |
alveolus of lung | 1.05e-10 | 3 |
alveolar system | 1.05e-10 | 3 |
pulmonary acinus | 1.05e-10 | 3 |
alveolar sac | 1.05e-10 | 3 |
alveolar wall | 1.05e-10 | 3 |
mammalian vulva | 1.37e-08 | 1 |
external female genitalia | 1.37e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.35e-15 | 2 |
cell type cancer | 1.01e-09 | 143 |
peripheral primitive neuroectodermal tumor | 5.59e-09 | 1 |
islet cell tumor | 1.18e-08 | 1 |
endocrine pancreas cancer | 1.18e-08 | 1 |
pancreatic endocrine carcinoma | 1.18e-08 | 1 |
squamous cell carcinoma | 1.71e-08 | 14 |
epithelioid sarcoma | 3.79e-08 | 1 |
lung cancer | 4.88e-08 | 15 |
carcinoma | 1.34e-07 | 106 |
respiratory system cancer | 1.53e-07 | 16 |
non-small cell lung carcinoma | 9.43e-07 | 5 |