FFCP PHASE1:Hg19::chr15:65935283..65935297,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:65935283..65935297,+
|short_description=p11@SLC24A1
|description=CAGE_peak_11_at_SLC24A1_5end
|association_with_transcript=40bp_to_ENST00000449142,NM_0012...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9187 | |EntrezGene=9187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10975 | |HGNC=10975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000449142,NM_001254740,uc010uji.1_5end | |||
|cluster_id=chr15:65935283..65935297,+ | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_11_at_SLC24A1_5end | |||
|id=chr15:65935283..65935297,+ | |||
|ontology_enrichment_celltype=CL:0002144!5.66e-14!3;CL:0000071!9.52e-14!18;CL:0002546!9.52e-14!18;CL:0002139!1.27e-12!24;CL:0000115!4.00e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002144;4.06e-99;3!CL:0000071;7.91e-30;18!CL:0002139;1.46e-22;24!CL:0002545;1.27e-17;2!CL:0002541;2.59e-12;3!CL:0002078;1.36e-10;45!CL:0000115;4.70e-10;36!CL:0000213;1.05e-07;58!CL:0000215;1.05e-07;58!CL:0002544;9.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,4.06e-99,3;CL:0000071,7.91e-30,18;CL:0002546,7.91e-30,18;CL:0002139,1.46e-22,24;CL:0002545,1.27e-17,2;CL:0000115,2.86e-15,36;CL:0002078,2.44e-12,45;CL:0002541,2.59e-12,3;CL:0000213,1.06e-09,58;CL:0000215,1.06e-09,58;CL:0000076,5.69e-09,63;CL:0002544,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.91e-30;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!5.66e-14!3;UBERON:0001982!5.66e-14!3;UBERON:0001986!9.52e-14!18;UBERON:0004638!9.52e-14!18;UBERON:0004852!9.52e-14!18;UBERON:0007023!2.48e-12!115;UBERON:0000487!5.38e-11!22;UBERON:0001630!1.15e-09!2;UBERON:0005090!1.15e-09!2;UBERON:0006914!1.64e-09!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;4.06e-99;3!UBERON:0001915;4.06e-99;3!UBERON:0001982;4.06e-99;3!UBERON:0002426;7.06e-34;1!UBERON:0003831;7.06e-34;1!UBERON:0003898;7.06e-34;1!UBERON:0004830;7.06e-34;1!UBERON:0003830;7.06e-34;1!UBERON:0005175;7.06e-34;1!UBERON:0001774;7.06e-34;1!UBERON:0001103;7.06e-34;1!UBERON:0004638;7.91e-30;18!UBERON:0001986;7.91e-30;18!UBERON:0004852;7.91e-30;18!UBERON:0000487;1.51e-24;22!UBERON:0006914;1.09e-21;25!UBERON:0005090;1.07e-17;2!UBERON:0001630;1.07e-17;2!UBERON:0005800;1.27e-17;2!UBERON:0001515;1.27e-17;2!UBERON:0000490;1.92e-14;33!UBERON:0003124;2.59e-12;3!UBERON:0000920;2.59e-12;3!UBERON:0007500;5.41e-09;56!UBERON:0001981;5.41e-09;56!UBERON:0004537;5.41e-09;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.06e-99,3;UBERON:0001915,4.06e-99,3;UBERON:0001982,4.06e-99,3;UBERON:0002426,7.06e-34,1;UBERON:0003831,7.06e-34,1;UBERON:0003898,7.06e-34,1;UBERON:0004830,7.06e-34,1;UBERON:0003830,7.06e-34,1;UBERON:0005175,7.06e-34,1;UBERON:0001774,7.06e-34,1;UBERON:0001103,7.06e-34,1;UBERON:0010084,7.06e-34,1;UBERON:0004638,7.91e-30,18;UBERON:0001986,7.91e-30,18;UBERON:0004852,7.91e-30,18;UBERON:0000487,1.51e-24,22;UBERON:0006914,1.09e-21,25;UBERON:0005090,1.07e-17,2;UBERON:0001630,1.07e-17,2;UBERON:0005800,1.27e-17,2;UBERON:0001515,1.27e-17,2;UBERON:0000920,2.59e-12,3;UBERON:0007500,1.52e-09,59;UBERON:0001981,1.52e-09,59;UBERON:0004537,1.52e-09,59;UBERON:0006965,1.52e-09,59;UBERON:0000055,2.38e-08,68;UBERON:0002049,2.43e-07,78;UBERON:0007798,2.43e-07,78;UBERON:0004872,6.33e-07,83 | |||
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| ||
|short_description=p11@SLC24A1 | |||
}} | }} |
Latest revision as of 15:35, 18 September 2015
Short description: | p11@SLC24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC24A1_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 40bp_to_ENST00000449142, NM_001254740, uc010uji.1_5end |
EntrezGene: | SLC24A1 |
HGNC: | 10975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 4.06e-99 | 3 |
blood vessel endothelial cell | 7.91e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.91e-30 | 18 |
endothelial cell of vascular tree | 1.46e-22 | 24 |
thoracic aorta endothelial cell | 1.27e-17 | 2 |
endothelial cell | 2.86e-15 | 36 |
meso-epithelial cell | 2.44e-12 | 45 |
chorionic membrane mesenchymal stem cell | 2.59e-12 | 3 |
lining cell | 1.06e-09 | 58 |
barrier cell | 1.06e-09 | 58 |
squamous epithelial cell | 5.69e-09 | 63 |
aortic endothelial cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.06e-99 | 3 |
endothelium of capillary | 4.06e-99 | 3 |
capillary | 4.06e-99 | 3 |
chest muscle | 7.06e-34 | 1 |
respiratory system muscle | 7.06e-34 | 1 |
skeletal muscle of trunk | 7.06e-34 | 1 |
respiratory system skeletal muscle | 7.06e-34 | 1 |
thoracic segment muscle | 7.06e-34 | 1 |
chest organ | 7.06e-34 | 1 |
muscle of trunk | 7.06e-34 | 1 |
diaphragm | 7.06e-34 | 1 |
future diaphragm | 7.06e-34 | 1 |
blood vessel endothelium | 7.91e-30 | 18 |
endothelium | 7.91e-30 | 18 |
cardiovascular system endothelium | 7.91e-30 | 18 |
simple squamous epithelium | 1.51e-24 | 22 |
squamous epithelium | 1.09e-21 | 25 |
muscle structure | 1.07e-17 | 2 |
muscle organ | 1.07e-17 | 2 |
segment of aorta | 1.27e-17 | 2 |
thoracic aorta | 1.27e-17 | 2 |
egg chorion | 2.59e-12 | 3 |
epithelial tube open at both ends | 1.52e-09 | 59 |
blood vessel | 1.52e-09 | 59 |
blood vasculature | 1.52e-09 | 59 |
vascular cord | 1.52e-09 | 59 |
vessel | 2.38e-08 | 68 |
vasculature | 2.43e-07 | 78 |
vascular system | 2.43e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 6.33e-07 | 83 |