FFCP PHASE1:Hg19::chr6:44265397..44265405,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202500 | |EntrezGene=202500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11693 | |HGNC=11693 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JU00 | |UniProt=Q5JU00 | ||
|association_with_transcript=19bp_to_ENST00000371505_5end | |association_with_transcript=19bp_to_ENST00000371505_5end | ||
|cluster_id=chr6:44265397..44265405,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_TCTE1_5end | |description=CAGE_peak_3_at_TCTE1_5end | ||
|id=chr6:44265397..44265405,- | |id=chr6:44265397..44265405,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!UBERON:0006215;1.03e-17;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.46e-38!34;UBERON:0001869!6.33e-36!32;UBERON:0002780!1.47e-35!41;UBERON:0001890!1.47e-35!41;UBERON:0006240!1.47e-35!41;UBERON:0002791!9.14e-35!33;UBERON:0003080!1.20e-34!42;UBERON:0003056!2.04e-32!61;UBERON:0001049!1.55e-31!57;UBERON:0005068!1.55e-31!57;UBERON:0006241!1.55e-31!57;UBERON:0007135!1.55e-31!57;UBERON:0002616!2.38e-30!59;UBERON:0003075!6.14e-30!86;UBERON:0007284!6.14e-30!86;UBERON:0005743!1.62e-29!86;UBERON:0002020!2.36e-29!34;UBERON:0003528!2.36e-29!34;UBERON:0007023!1.65e-28!115;UBERON:0002346!2.07e-28!90;UBERON:0002619!2.88e-28!22;UBERON:0000955!6.97e-28!69;UBERON:0006238!6.97e-28!69;UBERON:0000073!2.48e-26!94;UBERON:0001016!2.48e-26!94;UBERON:0001017!1.55e-25!82;UBERON:0000956!9.10e-25!25;UBERON:0000203!9.10e-25!25;UBERON:0001950!1.50e-20!20;UBERON:0000349!2.53e-19!5;UBERON:0000033!2.68e-19!123;UBERON:0000153!3.42e-18!129;UBERON:0007811!3.42e-18!129;UBERON:0004121!1.25e-15!169;UBERON:0000924!3.71e-15!173;UBERON:0006601!3.71e-15!173;UBERON:0000369!1.34e-13!4;UBERON:0002435!1.34e-13!4;UBERON:0000204!1.34e-13!4;UBERON:0010082!1.34e-13!4;UBERON:0001954!3.48e-13!2;UBERON:0003022!3.48e-13!2;UBERON:0002421!3.48e-13!2;UBERON:0002600!3.48e-13!2;UBERON:0001871!1.40e-11!7;UBERON:0002420!1.95e-10!9;UBERON:0007245!1.95e-10!9;UBERON:0010009!1.95e-10!9;UBERON:0010011!1.95e-10!9;UBERON:0000454!1.95e-10!9;UBERON:0000200!4.51e-09!6;UBERON:0002771!1.06e-08!3;UBERON:0005383!1.62e-08!3;UBERON:0005382!1.62e-08!3;UBERON:0009663!5.64e-08!7;UBERON:0000025!1.62e-07!194;UBERON:0001882!2.52e-07!1;UBERON:0005403!2.52e-07!1;UBERON:0000473!2.99e-07!8;UBERON:0002022!3.01e-07!1;UBERON:0000064!4.40e-07!219;UBERON:0001874!4.57e-07!1;UBERON:0002902!9.18e-07!1;UBERON:0009899!9.18e-07!1 | |ontology_enrichment_uberon=UBERON:0001893!2.46e-38!34;UBERON:0001869!6.33e-36!32;UBERON:0002780!1.47e-35!41;UBERON:0001890!1.47e-35!41;UBERON:0006240!1.47e-35!41;UBERON:0002791!9.14e-35!33;UBERON:0003080!1.20e-34!42;UBERON:0003056!2.04e-32!61;UBERON:0001049!1.55e-31!57;UBERON:0005068!1.55e-31!57;UBERON:0006241!1.55e-31!57;UBERON:0007135!1.55e-31!57;UBERON:0002616!2.38e-30!59;UBERON:0003075!6.14e-30!86;UBERON:0007284!6.14e-30!86;UBERON:0005743!1.62e-29!86;UBERON:0002020!2.36e-29!34;UBERON:0003528!2.36e-29!34;UBERON:0007023!1.65e-28!115;UBERON:0002346!2.07e-28!90;UBERON:0002619!2.88e-28!22;UBERON:0000955!6.97e-28!69;UBERON:0006238!6.97e-28!69;UBERON:0000073!2.48e-26!94;UBERON:0001016!2.48e-26!94;UBERON:0001017!1.55e-25!82;UBERON:0000956!9.10e-25!25;UBERON:0000203!9.10e-25!25;UBERON:0001950!1.50e-20!20;UBERON:0000349!2.53e-19!5;UBERON:0000033!2.68e-19!123;UBERON:0000153!3.42e-18!129;UBERON:0007811!3.42e-18!129;UBERON:0004121!1.25e-15!169;UBERON:0000924!3.71e-15!173;UBERON:0006601!3.71e-15!173;UBERON:0000369!1.34e-13!4;UBERON:0002435!1.34e-13!4;UBERON:0000204!1.34e-13!4;UBERON:0010082!1.34e-13!4;UBERON:0001954!3.48e-13!2;UBERON:0003022!3.48e-13!2;UBERON:0002421!3.48e-13!2;UBERON:0002600!3.48e-13!2;UBERON:0001871!1.40e-11!7;UBERON:0002420!1.95e-10!9;UBERON:0007245!1.95e-10!9;UBERON:0010009!1.95e-10!9;UBERON:0010011!1.95e-10!9;UBERON:0000454!1.95e-10!9;UBERON:0000200!4.51e-09!6;UBERON:0002771!1.06e-08!3;UBERON:0005383!1.62e-08!3;UBERON:0005382!1.62e-08!3;UBERON:0009663!5.64e-08!7;UBERON:0000025!1.62e-07!194;UBERON:0001882!2.52e-07!1;UBERON:0005403!2.52e-07!1;UBERON:0000473!2.99e-07!8;UBERON:0002022!3.01e-07!1;UBERON:0000064!4.40e-07!219;UBERON:0001874!4.57e-07!1;UBERON:0002902!9.18e-07!1;UBERON:0009899!9.18e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0002037;1.50e-09;6!UBERON:0002680;8.61e-07;9!UBERON:0001895;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0002037,1.44e-09,6;UBERON:0006215,1.44e-09,6;UBERON:0002680,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,2.27336094654718,4.28742608249886,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,2.27336094654718,4.28742608249886,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TCTE1 | |short_description=p3@TCTE1 | ||
}} | }} |
Latest revision as of 00:29, 19 September 2015
Short description: | p3@TCTE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TCTE1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 19bp_to_ENST00000371505_5end |
EntrezGene: | TCTE1 |
HGNC: | 11693 |
UniProt: | Q5JU00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
cerebellum | 1.44e-09 | 6 |
rhombic lip | 1.44e-09 | 6 |
regional part of metencephalon | 8.37e-07 | 9 |
metencephalon | 8.37e-07 | 9 |
future metencephalon | 8.37e-07 | 9 |