FFCP PHASE1:Hg19::chr6:50061315..50061323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000415106_5end | |association_with_transcript=-100bp_to_ENST00000415106_5end | ||
|cluster_id=chr6:50061315..50061323,+ | |||
|coexpression_cluster_id=C1197 | |||
|description=CAGE_peak_1_at_ENST00000415106_5end | |description=CAGE_peak_1_at_ENST00000415106_5end | ||
|id=chr6:50061315..50061323,+ | |id=chr6:50061315..50061323,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.56e-23!12;CL:0000417!5.56e-23!12;CL:0000668!5.56e-23!12;CL:0000414!5.56e-23!12;CL:0000412!5.56e-23!12;CL:0000182!5.56e-23!12 | |ontology_enrichment_celltype=CL:0000181!5.56e-23!12;CL:0000417!5.56e-23!12;CL:0000668!5.56e-23!12;CL:0000414!5.56e-23!12;CL:0000412!5.56e-23!12;CL:0000182!5.56e-23!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.01e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.18e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;9.46e-21;13!UBERON:0004161;2.95e-14;11!UBERON:0003104;2.41e-13;31!UBERON:0007297;1.71e-09;2!UBERON:0001041;3.48e-09;30!UBERON:0003918;1.79e-07;10!UBERON:0007687;1.79e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!1.56e-27!22;UBERON:0003894!1.56e-27!22;UBERON:0009854!2.80e-26!23;UBERON:0002107!2.42e-25!19;UBERON:0006925!2.42e-25!19;UBERON:0008836!2.42e-25!19;UBERON:0007499!4.52e-24!25;UBERON:0009497!4.52e-24!25;UBERON:0000015!4.52e-24!25;UBERON:0002423!4.52e-24!25;UBERON:0006235!4.52e-24!25;UBERON:0004161!4.52e-24!25;UBERON:0009856!4.28e-23!26;UBERON:0005172!2.43e-18!55;UBERON:0005173!2.43e-18!55;UBERON:0005057!3.07e-18!26;UBERON:0002417!2.50e-16!61;UBERON:0000916!2.50e-16!61;UBERON:0003929!1.60e-15!54;UBERON:0002365!3.99e-15!31;UBERON:0002330!3.99e-15!31;UBERON:0002368!2.84e-13!35;UBERON:0000949!4.42e-10!45;UBERON:0005911!1.39e-09!82;UBERON:0002530!2.48e-09!59;UBERON:0001301!3.31e-09!1;UBERON:0004921!4.69e-09!129;UBERON:0004185!4.69e-09!129;UBERON:0005177!2.13e-08!107;UBERON:0009569!7.69e-08!113;UBERON:0001007!3.99e-07!155;UBERON:0001555!3.99e-07!155;UBERON:0007026!3.99e-07!155 | |ontology_enrichment_uberon=UBERON:0008835!1.56e-27!22;UBERON:0003894!1.56e-27!22;UBERON:0009854!2.80e-26!23;UBERON:0002107!2.42e-25!19;UBERON:0006925!2.42e-25!19;UBERON:0008836!2.42e-25!19;UBERON:0007499!4.52e-24!25;UBERON:0009497!4.52e-24!25;UBERON:0000015!4.52e-24!25;UBERON:0002423!4.52e-24!25;UBERON:0006235!4.52e-24!25;UBERON:0004161!4.52e-24!25;UBERON:0009856!4.28e-23!26;UBERON:0005172!2.43e-18!55;UBERON:0005173!2.43e-18!55;UBERON:0005057!3.07e-18!26;UBERON:0002417!2.50e-16!61;UBERON:0000916!2.50e-16!61;UBERON:0003929!1.60e-15!54;UBERON:0002365!3.99e-15!31;UBERON:0002330!3.99e-15!31;UBERON:0002368!2.84e-13!35;UBERON:0000949!4.42e-10!45;UBERON:0005911!1.39e-09!82;UBERON:0002530!2.48e-09!59;UBERON:0001301!3.31e-09!1;UBERON:0004921!4.69e-09!129;UBERON:0004185!4.69e-09!129;UBERON:0005177!2.13e-08!107;UBERON:0009569!7.69e-08!113;UBERON:0001007!3.99e-07!155;UBERON:0001555!3.99e-07!155;UBERON:0007026!3.99e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.25e-23;25!UBERON:0002107;7.73e-22;19!UBERON:0006925;7.73e-22;19!UBERON:0001301;1.22e-17;1!UBERON:0002365;2.09e-13;31!UBERON:0002330;2.09e-13;31!UBERON:0005172;3.16e-11;52!UBERON:0005173;3.16e-11;52!UBERON:0002368;3.58e-11;33!UBERON:0000058;1.62e-07;10!UBERON:0006947;9.64e-07;3!UBERON:0004054;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,6.75e-27,22;UBERON:0003894,6.75e-27,22;UBERON:0009854,1.00e-25,23;UBERON:0007499,1.15e-23,25;UBERON:0009497,1.15e-23,25;UBERON:0000015,1.15e-23,25;UBERON:0002423,1.15e-23,25;UBERON:0006235,1.15e-23,25;UBERON:0004161,1.15e-23,25;UBERON:0009856,9.40e-23,26;UBERON:0002107,7.08e-22,19;UBERON:0006925,7.08e-22,19;UBERON:0008836,7.08e-22,19;UBERON:0005172,5.77e-19,54;UBERON:0005173,5.77e-19,54;UBERON:0001301,1.22e-17,1;UBERON:0002417,5.08e-17,60;UBERON:0000916,5.08e-17,60;UBERON:0002365,1.87e-13,31;UBERON:0002330,1.87e-13,31;UBERON:0002368,6.33e-12,35;UBERON:0003929,6.95e-11,54;UBERON:0005177,6.92e-10,101;UBERON:0000949,2.78e-09,45;UBERON:0009569,7.45e-09,112;UBERON:0003104,1.26e-07,160;UBERON:0009142,1.26e-07,160;UBERON:0005911,4.38e-07,82;UBERON:0002530,4.48e-07,59;UBERON:0006947,9.64e-07,3;UBERON:0004054,9.64e-07,3 | |||
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|short_description=p1@ENST00000415106 | |short_description=p1@ENST00000415106 | ||
}} | }} |
Latest revision as of 02:16, 31 July 2015
Short description: | p1@ENST00000415106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000415106_5end |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | -100bp_to_ENST00000415106_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.18e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 6.75e-27 | 22 |
liver primordium | 6.75e-27 | 22 |
digestive tract diverticulum | 1.00e-25 | 23 |
epithelial sac | 1.15e-23 | 25 |
epithelium of foregut-midgut junction | 1.15e-23 | 25 |
anatomical boundary | 1.15e-23 | 25 |
hepatobiliary system | 1.15e-23 | 25 |
foregut-midgut junction | 1.15e-23 | 25 |
septum transversum | 1.15e-23 | 25 |
sac | 9.40e-23 | 26 |
liver | 7.08e-22 | 19 |
digestive gland | 7.08e-22 | 19 |
liver bud | 7.08e-22 | 19 |
abdomen element | 5.77e-19 | 54 |
abdominal segment element | 5.77e-19 | 54 |
epididymis | 1.22e-17 | 1 |
abdominal segment of trunk | 5.08e-17 | 60 |
abdomen | 5.08e-17 | 60 |
exocrine gland | 1.87e-13 | 31 |
exocrine system | 1.87e-13 | 31 |
endocrine gland | 6.33e-12 | 35 |
gut epithelium | 6.95e-11 | 54 |
trunk region element | 6.92e-10 | 101 |
endocrine system | 2.78e-09 | 45 |
subdivision of trunk | 7.45e-09 | 112 |
mesenchyme | 1.26e-07 | 160 |
entire embryonic mesenchyme | 1.26e-07 | 160 |
endo-epithelium | 4.38e-07 | 82 |
gland | 4.48e-07 | 59 |
male genital duct | 9.64e-07 | 3 |
internal male genitalia | 9.64e-07 | 3 |