FFCP PHASE1:Hg19::chr7:100174311..100174318,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4034 | |EntrezGene=4034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6691 | |HGNC=6691 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=399bp_to_ENST00000490359_5end | |association_with_transcript=399bp_to_ENST00000490359_5end | ||
|cluster_id=chr7:100174311..100174318,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_LRCH4_5end | |description=CAGE_peak_3_at_LRCH4_5end | ||
|id=chr7:100174311..100174318,- | |id=chr7:100174311..100174318,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;6.72e-26;1!CL:0002262;1.14e-13;2!CL:1000398;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.58e-26,1;CL:0002262,9.40e-14,2;CL:1000398,9.40e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.14e-13;2!UBERON:0003497;1.14e-13;2!UBERON:0003909;1.14e-13;2!UBERON:0003835;1.14e-13;2!UBERON:0001280;1.47e-09;3!UBERON:0004647;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,9.40e-14,2;UBERON:0003497,9.40e-14,2;UBERON:0003909,9.40e-14,2;UBERON:0003835,9.40e-14,2;UBERON:0001280,1.30e-09,3;UBERON:0004647,1.30e-09,3;UBERON:0005171,1.30e-09,3 | |||
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| ||
|short_description=p3@LRCH4 | |short_description=p3@LRCH4 | ||
}} | }} |
Latest revision as of 07:36, 20 September 2015
Short description: | p3@LRCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRCH4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 399bp_to_ENST00000490359_5end |
EntrezGene: | LRCH4 |
HGNC: | 6691 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.58e-26 | 1 |
endothelial cell of sinusoid | 9.40e-14 | 2 |
endothelial cell of hepatic sinusoid | 9.40e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 9.40e-14 | 2 |
abdomen blood vessel | 9.40e-14 | 2 |
sinusoid | 9.40e-14 | 2 |
abdominal segment blood vessel | 9.40e-14 | 2 |
liver parenchyma | 1.30e-09 | 3 |
liver lobule | 1.30e-09 | 3 |
hepatic duct | 1.30e-09 | 3 |