FFCP PHASE1:Hg19::chr7:116096018..116096020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:116096018..116096020,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr7:116096018..116096020,+ | |description=CAGE_peak_at_chr7:116096018..116096020,+ | ||
|id=chr7:116096018..116096020,+ | |id=chr7:116096018..116096020,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.06e-20!5;CL:0000039!1.44e-20!7;CL:0000586!1.44e-20!7;CL:0000066!1.76e-13!254;CL:0000083!4.97e-09!4;CL:0000540!5.27e-07!6;CL:0000031!5.27e-07!6;CL:0000404!5.27e-07!6 | |ontology_enrichment_celltype=CL:0002322!1.06e-20!5;CL:0000039!1.44e-20!7;CL:0000586!1.44e-20!7;CL:0000066!1.76e-13!254;CL:0000083!4.97e-09!4;CL:0000540!5.27e-07!6;CL:0000031!5.27e-07!6;CL:0000404!5.27e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.48e-43;6!CL:0000404;6.48e-43;6!CL:0000039;9.67e-37;7!CL:0000586;9.67e-37;7!CL:0002319;3.58e-10;25!CL:0002322;5.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.48e-43,6;CL:0000031,7.48e-43,6;CL:0000404,7.48e-43,6;CL:0000039,9.10e-37,7;CL:0000586,9.10e-37,7;CL:0000047,2.19e-32,8;CL:0002319,3.69e-10,25;CL:0000133,6.28e-08,59;CL:0002322,5.08e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;6.48e-43;6!UBERON:0009117;5.29e-26;10!UBERON:0005564;5.29e-26;10 | |||
|ontology_enrichment_disease=DOID:305!2.60e-34!106;DOID:0050687!2.83e-32!143;DOID:162!2.01e-18!235;DOID:14566!7.52e-18!239;DOID:3095!1.92e-13!22;DOID:2994!1.92e-13!22;DOID:1749!1.66e-12!14;DOID:1793!4.97e-09!4;DOID:3493!1.14e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.91e-12;22!DOID:2994;2.91e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.85e-12,22;DOID:2994,2.85e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.14e-08!8 | |ontology_enrichment_uberon=UBERON:0000473!1.14e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.86e-32;8!UBERON:0003135;1.01e-23;11!UBERON:0000991;8.22e-13;21!UBERON:0003101;2.91e-12;22!UBERON:0000079;2.91e-12;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.71e-32,8;UBERON:0003135,9.75e-24,11;UBERON:0000991,8.05e-13,21;UBERON:0009196,8.05e-13,21;UBERON:0009117,8.05e-13,21;UBERON:0005564,8.05e-13,21;UBERON:0004176,2.85e-12,22;UBERON:0003101,2.85e-12,22;UBERON:0000079,2.85e-12,22 | |||
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| ||
|short_description=p@chr7:116096018..116096020,+ | |short_description=p@chr7:116096018..116096020,+ | ||
}} | }} |
Latest revision as of 05:14, 31 July 2015
Short description: | p@chr7:116096018..116096020, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:116096018..116096020, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.48e-43 | 6 |
neuroblast | 7.48e-43 | 6 |
electrically signaling cell | 7.48e-43 | 6 |
germ line cell | 9.10e-37 | 7 |
germ cell | 9.10e-37 | 7 |
neuronal stem cell | 2.19e-32 | 8 |
neural cell | 3.69e-10 | 25 |
neurectodermal cell | 6.28e-08 | 59 |
embryonic stem cell | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.71e-32 | 8 |
male reproductive organ | 9.75e-24 | 11 |
gonad | 8.05e-13 | 21 |
indifferent external genitalia | 8.05e-13 | 21 |
indifferent gonad | 8.05e-13 | 21 |
gonad primordium | 8.05e-13 | 21 |
external genitalia | 2.85e-12 | 22 |
male organism | 2.85e-12 | 22 |
male reproductive system | 2.85e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.85e-12 | 22 |
germ cell cancer | 2.85e-12 | 22 |