FFCP PHASE1:Hg19::chr15:72978517..72978528,-: Difference between revisions
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|id=chr15:72978517..72978528,-
|short_description=p3@HIGD2B
|description=CAGE_peak_3_at_HIGD2B_5end
|association_with_transcript=-27bp_to_ENST00000311755,NR_002780,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123346 | |EntrezGene=123346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26984 | |HGNC=26984 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VC39 | |UniProt=Q4VC39 | ||
|association_with_transcript=-27bp_to_ENST00000311755,NR_002780,uc002ava.2_5end | |||
|cluster_id=chr15:72978517..72978528,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_HIGD2B_5end | |||
|id=chr15:72978517..72978528,- | |||
|ontology_enrichment_celltype=CL:0002598!7.60e-07!1;CL:0000319!8.49e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.00e-40;10!UBERON:0005564;2.00e-40;10 | |||
|ontology_enrichment_disease=DOID:299!3.55e-07!25;DOID:1799!7.19e-07!1;DOID:10165!7.19e-07!1;DOID:1798!7.19e-07!1;DOID:3030!8.49e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.99e-50;8!UBERON:0003135;6.80e-37;11!UBERON:0000991;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0003133;3.54e-08;44!UBERON:0002323;3.39e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.99e-50,8;UBERON:0003135,6.80e-37,11;UBERON:0000991,4.86e-20,21;UBERON:0009196,4.86e-20,21;UBERON:0009117,4.86e-20,21;UBERON:0005564,4.86e-20,21;UBERON:0004176,3.41e-19,22;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0002323,7.07e-10,46;UBERON:0003133,1.62e-09,48;UBERON:0004458,2.38e-09,49;UBERON:0003886,1.34e-08,54;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0002553,9.44e-08,61 | |||
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|short_description=p3@HIGD2B | |||
}} | }} |
Latest revision as of 23:12, 18 September 2015
Short description: | p3@HIGD2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HIGD2B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -27bp_to_ENST00000311755, NR_002780, uc002ava.2_5end |
EntrezGene: | HIGD2B |
HGNC: | 26984 |
UniProt: | Q4VC39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.99e-50 | 8 |
male reproductive organ | 6.80e-37 | 11 |
gonad | 4.86e-20 | 21 |
indifferent external genitalia | 4.86e-20 | 21 |
indifferent gonad | 4.86e-20 | 21 |
gonad primordium | 4.86e-20 | 21 |
external genitalia | 3.41e-19 | 22 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
body cavity | 7.07e-10 | 46 |
reproductive organ | 1.62e-09 | 48 |
body cavity or lining | 2.38e-09 | 49 |
body cavity precursor | 1.34e-08 | 54 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
anatomical cavity | 9.44e-08 | 61 |