FFCP PHASE1:Hg19::chr7:16873035..16873059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10551 | |EntrezGene=10551 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=328 | |HGNC=328 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3E2 | |UniProt=C9J3E2 | ||
|association_with_transcript=0bp_to_ENST00000412973_5end | |association_with_transcript=0bp_to_ENST00000412973_5end | ||
|cluster_id=chr7:16873035..16873059,- | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_6_at_AGR2_5end | |description=CAGE_peak_6_at_AGR2_5end | ||
|id=chr7:16873035..16873059,- | |id=chr7:16873035..16873059,- | ||
|ontology_enrichment_celltype=CL:0002541!1.32e-33!3;CL:0002536!2.49e-23!2;CL:1000415!6.07e-07!2 | |ontology_enrichment_celltype=CL:0002541!1.32e-33!3;CL:0002536!2.49e-23!2;CL:1000415!6.07e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;5.96e-34;3!UBERON:0003353;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:178!2.75e-12!1;DOID:326!2.75e-12!1;DOID:3978!2.75e-12!1;DOID:3394!2.75e-12!1;DOID:5844!2.75e-12!1;DOID:114!9.02e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.32e-33!3;UBERON:0000920!1.32e-33!3;UBERON:0005631!3.99e-28!14;UBERON:0000158!3.99e-28!14;UBERON:0000478!2.72e-16!24;UBERON:0000305!5.55e-15!7;UBERON:0003124!8.50e-15!7;UBERON:0004871!3.48e-13!8;UBERON:0002022!4.81e-12!1;UBERON:0001046!1.14e-09!19;UBERON:0000162!1.06e-07!14;UBERON:0001353!1.06e-07!14;UBERON:0000163!1.06e-07!14;UBERON:0006866!1.06e-07!14;UBERON:0000164!1.06e-07!14;UBERON:0000931!1.06e-07!14;UBERON:0004122!3.22e-07!15 | |ontology_enrichment_uberon=UBERON:0000476!1.32e-33!3;UBERON:0000920!1.32e-33!3;UBERON:0005631!3.99e-28!14;UBERON:0000158!3.99e-28!14;UBERON:0000478!2.72e-16!24;UBERON:0000305!5.55e-15!7;UBERON:0003124!8.50e-15!7;UBERON:0004871!3.48e-13!8;UBERON:0002022!4.81e-12!1;UBERON:0001046!1.14e-09!19;UBERON:0000162!1.06e-07!14;UBERON:0001353!1.06e-07!14;UBERON:0000163!1.06e-07!14;UBERON:0006866!1.06e-07!14;UBERON:0000164!1.06e-07!14;UBERON:0000931!1.06e-07!14;UBERON:0004122!3.22e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000059;2.16e-10;11!UBERON:0002367;2.37e-10;11!UBERON:0010147;2.37e-10;11!UBERON:0003937;1.33e-09;12!UBERON:0005399;1.33e-09;12!UBERON:0000160;7.18e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.56e-26,4;UBERON:0001046,5.37e-22,19;UBERON:0004907,4.21e-21,5;UBERON:0000059,2.16e-10,11;UBERON:0002367,2.37e-10,11;UBERON:0010147,2.37e-10,11;UBERON:0009846,2.37e-10,11;UBERON:0003353,2.37e-10,11;UBERON:0004902,2.37e-10,11;UBERON:0003820,2.37e-10,11;UBERON:0009847,2.37e-10,11;UBERON:0003937,1.33e-09,12;UBERON:0005399,1.33e-09,12;UBERON:0000162,2.00e-08,14;UBERON:0001353,2.00e-08,14;UBERON:0000163,2.00e-08,14;UBERON:0006866,2.00e-08,14;UBERON:0000164,2.00e-08,14;UBERON:0000931,2.00e-08,14;UBERON:0004122,5.93e-08,15;UBERON:0000160,7.18e-07,17 | |||
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|short_description=p6@AGR2 | |short_description=p6@AGR2 | ||
}} | }} |
Latest revision as of 13:13, 17 September 2015
Short description: | p6@AGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AGR2_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | 0bp_to_ENST00000412973_5end |
EntrezGene: | AGR2 |
HGNC: | 328 |
UniProt: | C9J3E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
rectum | 5.56e-26 | 4 |
hindgut | 5.37e-22 | 19 |
lower digestive tract | 4.21e-21 | 5 |
large intestine | 2.16e-10 | 11 |
prostate gland | 2.37e-10 | 11 |
male accessory sex gland | 2.37e-10 | 11 |
embryonic cloacal epithelium | 2.37e-10 | 11 |
epithelium of hindgut | 2.37e-10 | 11 |
urogenital sinus epithelium | 2.37e-10 | 11 |
prostate bud | 2.37e-10 | 11 |
prostate field | 2.37e-10 | 11 |
sex gland | 1.33e-09 | 12 |
male reproductive gland | 1.33e-09 | 12 |
cloaca | 2.00e-08 | 14 |
anal region | 2.00e-08 | 14 |
embryonic cloaca | 2.00e-08 | 14 |
terminal part of digestive tract | 2.00e-08 | 14 |
primitive urogenital sinus | 2.00e-08 | 14 |
proctodeum | 2.00e-08 | 14 |
genitourinary system | 5.93e-08 | 15 |
intestine | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |