FFCP PHASE1:Hg19::chr7:20686946..20686958,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340273 | |EntrezGene=340273 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=46 | |HGNC=46 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477094_5end | |association_with_transcript=0bp_to_ENST00000477094_5end | ||
|cluster_id=chr7:20686946..20686958,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_1_at_ABCB5_5end | |description=CAGE_peak_1_at_ABCB5_5end | ||
|id=chr7:20686946..20686958,+ | |id=chr7:20686946..20686958,+ | ||
|ontology_enrichment_celltype=CL:0000147!5.14e-17!14;CL:0000148!6.51e-13!10;CL:0000541!6.51e-13!10;CL:0002567!4.10e-09!3;CL:0002619!2.23e-08!3;CL:0000325!5.12e-08!39;CL:0000710!2.75e-07!20 | |ontology_enrichment_celltype=CL:0000147!5.14e-17!14;CL:0000148!6.51e-13!10;CL:0000541!6.51e-13!10;CL:0002567!4.10e-09!3;CL:0002619!2.23e-08!3;CL:0000325!5.12e-08!39;CL:0000710!2.75e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.27e-40;10!CL:0000147;2.50e-28;14!CL:0002567;1.57e-25;3!CL:0000710;1.31e-19;20!CL:0000075;2.52e-14;27!CL:0000235;2.11e-12;6!CL:0002077;5.10e-10;34!CL:0002566;1.03e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.27e-40,10;CL:0000541,6.27e-40,10;CL:0000147,2.51e-28,14;CL:0002567,1.57e-25,3;CL:0000710,1.31e-19,20;CL:0000075,2.52e-14,27;CL:0000235,1.87e-12,6;CL:0002077,3.28e-11,34;CL:0002566,1.03e-09,1;CL:0000333,1.08e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.25e-17;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.25e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!2.94e-12!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0.363356758541113,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.971680998056939,1.03030227053675,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0,0,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,3.20082107913617,0.936017060556951,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0,118.042585489142,146.683555414379,141.833111124157,11.9750712215894,90.4881935789247,94.0073771051462,165.493504493105,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,3.01439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.976135183992909,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35096621849796,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,7.24999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27292988662355,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,42.613402029203,14.8441973443383,0,0,0,0,0,0,0.189403005275089,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,1.41287567130925,0,0,0,0,0,45.6020351847068,0,0,0,0,0,0,0,0,0.354996002191696,0.426067023795788,0,0,0,0,0,0,0,0,0.718639647993729,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0,0,0.490296643507811,0,0.981542335574726,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p1@ABCB5 | |short_description=p1@ABCB5 | ||
}} | }} |
Latest revision as of 17:38, 17 September 2015
Short description: | p1@ABCB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCB5_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000477094_5end |
EntrezGene: | ABCB5 |
HGNC: | 46 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.27e-40 | 10 |
melanoblast | 6.27e-40 | 10 |
pigment cell | 2.51e-28 | 14 |
light melanocyte | 1.57e-25 | 3 |
neurecto-epithelial cell | 1.31e-19 | 20 |
columnar/cuboidal epithelial cell | 2.52e-14 | 27 |
macrophage | 1.87e-12 | 6 |
ecto-epithelial cell | 3.28e-11 | 34 |
dark melanocyte | 1.03e-09 | 1 |
migratory neural crest cell | 1.08e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.25e-17 | 2 |