FFCP PHASE1:Hg19::chr7:42276787..42276815,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2737 | |EntrezGene=2737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4319 | |HGNC=4319 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEV4 | |UniProt=F8WEV4 | ||
|association_with_transcript=-129bp_to_ENST00000437480_5end | |association_with_transcript=-129bp_to_ENST00000437480_5end | ||
|cluster_id=chr7:42276787..42276815,- | |||
|description=CAGE_peak_1_at_GLI3_5end | |description=CAGE_peak_1_at_GLI3_5end | ||
|id=chr7:42276787..42276815,- | |id=chr7:42276787..42276815,- | ||
|ontology_enrichment_celltype=CL:0000055!3.71e-24!180;CL:0000057!3.32e-13!75;CL:0002620!6.38e-10!23 | |ontology_enrichment_celltype=CL:0000055!3.71e-24!180;CL:0000057!3.32e-13!75;CL:0002620!6.38e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.37e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.03e-13,76;CL:0002620,2.20e-10,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.28e-16!659;UBERON:0000475!5.38e-16!365;UBERON:0003102!1.08e-15!95;UBERON:0000481!2.34e-11!347;UBERON:0000467!4.36e-11!625;UBERON:0000480!5.96e-11!626;UBERON:0004121!2.77e-10!169;UBERON:0000924!4.79e-10!173;UBERON:0006601!4.79e-10!173;UBERON:0002199!1.31e-09!45;UBERON:0002416!1.31e-09!45;UBERON:0000922!5.00e-09!612;UBERON:0002097!7.07e-09!40;UBERON:0000064!1.20e-08!219;UBERON:0000033!3.17e-08!123;UBERON:0000153!3.21e-08!129;UBERON:0007811!3.21e-08!129;UBERON:0000062!1.02e-07!511;UBERON:0002050!1.19e-07!605;UBERON:0005423!1.19e-07!605;UBERON:0000923!2.21e-07!604;UBERON:0005291!2.21e-07!604;UBERON:0006598!2.21e-07!604;UBERON:0002532!2.21e-07!604 | |ontology_enrichment_uberon=UBERON:0000468!2.28e-16!659;UBERON:0000475!5.38e-16!365;UBERON:0003102!1.08e-15!95;UBERON:0000481!2.34e-11!347;UBERON:0000467!4.36e-11!625;UBERON:0000480!5.96e-11!626;UBERON:0004121!2.77e-10!169;UBERON:0000924!4.79e-10!173;UBERON:0006601!4.79e-10!173;UBERON:0002199!1.31e-09!45;UBERON:0002416!1.31e-09!45;UBERON:0000922!5.00e-09!612;UBERON:0002097!7.07e-09!40;UBERON:0000064!1.20e-08!219;UBERON:0000033!3.17e-08!123;UBERON:0000153!3.21e-08!129;UBERON:0007811!3.21e-08!129;UBERON:0000062!1.02e-07!511;UBERON:0002050!1.19e-07!605;UBERON:0005423!1.19e-07!605;UBERON:0000923!2.21e-07!604;UBERON:0005291!2.21e-07!604;UBERON:0006598!2.21e-07!604;UBERON:0002532!2.21e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.15e-08;41!UBERON:0003102;1.18e-07;50!UBERON:0002199;5.09e-07;46!UBERON:0002416;5.09e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.14e-15,99;UBERON:0002199,1.08e-10,46;UBERON:0002416,1.08e-10,46;UBERON:0002097,6.38e-10,41;UBERON:0004121,2.78e-09,171;UBERON:0000924,2.78e-09,171;UBERON:0006601,2.78e-09,171;UBERON:0011216,6.65e-07,223 | |||
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|phase1_expression=2.54349730978779,4.71021152560163,0.845726424575827,4.00293193412522,2.23480547213644,2.61701557230111,5.06599756336621,1.89515962028049,8.88031135879451,0.737201809504527,2.79120467188971,6.11635841964482,2.63766978228454,2.47532705920093,4.97096063591874,2.6893005858071,4.21886169616784,3.65155045193687,1.46379839637152,11.8196215753716,8.97603041474713,8.46327747990837,35.20702641712,35.1767272437312,49.2127147211627,0,0,0,0,0,0,0.919421224478927,2.10844143144775,0.739508020333575,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.918251677112708,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,4.87613732627923,2.01210257911091,0.383587685530591,14.0961269429981,7.52006865953834,8.40109809972778,6.36228757640879,6.8128881842369,4.44313640671119,5.98669373148923,2.81071314218003,6.02503747289478,3.64295288292542,4.44941331341315,0,0,0,0,0,0,0.79504962946682,2.58070378531837,2.77712401286075,2.26123176769604,3.35599548967925,1.37559020970034,2.08994966536811,0.258416759169329,0.35576626268671,1.00416183829401,1.61131726843659,0,0,0.367663080345869,0.81014194788176,2.05389375053383,1.12264686313085,1.12611480483322,1.53316637465883,1.89853131913626,0.732806975721629,0,0,1.74437620857014,1.49091585508596,1.2663051166458,1.32409180813219,4.58938593198102,4.965357350777,2.24271040056923,2.1349799145941,1.2333377420858,7.15785381419462,2.2900814251847,3.43269996538263,2.27036141467397,1.72852777344,5.85803579584492,3.43376084513353,2.85235910772225,3.28787097213962,6.22402842811954,10.1979954951923,9.97200727585964,5.30800845262722,3.19369225010597,9.29932030581889,13.0680314301026,10.1379441004208,19.1133886006986,9.3420358436111,3.53505839303539,8.88341491090946,6.09541054065202,5.70670907145089,2.45190236639216,3.90618953157152,1.13432183160021,9.86642996288741,14.0947876620254,8.68920794754204,11.4034616512073,15.8700895027196,14.9431513226465,12.8420630868797,10.4641325989585,7.98983442321829,18.9325330683086,21.7237760795826,11.153577920498,22.3656043285467,7.45565526884538,4.74769658469365,1.35282597214308,1.09098448236334,0.860413786167011,3.65921118388786,2.78312513475119,4.53156377191122,22.1834657732893,5.55105871926382,2.91981887260664,20.3384392028761,27.0161194041012,9.66944449467364,11.1448302727675,7.21879481669586,3.19428360107579,3.03452442140583,3.13314338848527,3.639701100169,1.30727666455444,2.84724742933316,2.15730093056263,1.96221465125346,3.46272441251751,2.21446636387394,5.60967095213783,18.9324045212444,20.5812195939759,0,0,1.18157981336281,0,0,1.71567810298526,2.19500570817251,0,1.10581869652794,1.66659201285353,4.56131627434455,6.23960871167747,1.44331342025273,4.521285794028,1.6437217193015,0.577465791044295,0.462985512576611,0,2.37061319387782,6.86788929675898,0,0,0,0,3.02367830757947,1.27597587518148,2.14940454486836,2.03443756959773,3.06706143332169,0,0,2.90259361757081,2.30591925467138,2.01987893482208,1.58744735730423,5.72982638337417,2.34434894420094,0,2.05654985406647,1.8020583470635,1.71495859578347,4.93376771119587,2.1798003441664,1.0267360014933,3.74887975697556,14.3062578340753,3.381211010224,1.59562869950922,0,7.9734286021264,5.67396528093113,5.59486575933809,3.28849385413739,6.51145926469732,3.29296134712308,1.95441710576241,1.77695974371273,0.791951872933429,0.602878754119172,0,2.39935178836937,0,0,0,0,2.29723871668228,7.13184525203592,1.15825045334063,1.84928690295345,0.716243852959582,0,0,0.215627574859517,0,55.6467227047195,20.8223766172195,16.2390650683316,5.36052049069916,14.0346525363696,0,0,0,8.46571292862065,5.50187573165645,4.34024037919577,1.45579603071565,0.356857977594324,1.57702415033935,0.937131319941706,10.8340595901979,9.09630016223939,7.24311499047534,6.64225598535437,3.87175253937577,9.1227795191487,8.2236486134351,7.20601190002797,0,0.647142602455851,0,0,1.66435439510497,3.62868351995616,0.992431231275107,1.84154367945675,3.92924132206303,0.384417447767103,5.62877973973374,0.160853921143607,1.48418066444991,4.93471020168498,2.66342587969691,4.27061211271807,1.55776328755086,5.22946703069817,0.120859449591622,0.802025881213139,0.368323955743585,4.36294903025506,3.09554985611419,9.57208229203796,0.451199612907412,0.847168708148562,0.784349769176855,2.92278449306521,0.527758144464379,1.13733384070897,2.72149928442425,1.94324324491925,3.08454505380579,1.62567862526312,2.50844886927427,0.254876273045038,0,0.895499018888713,0,0,0.256450125116389,2.62411716559765,0.976135183992909,5.564214628977,8.24125183365091,5.85817449436175,4.59412430396938,5.20048196829217,3.21367859688319,2.80345083047154,4.46740989632469,5.52613229014066,2.89456802217514,6.66005518183296,8.55598494093948,4.94314439013385,6.85546674479878,0.661139661443912,1.72971060628596,2.29702882490251,3.2370489873776,1.85938219718914,2.2036864278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| ||
|short_description=p1@GLI3 | |short_description=p1@GLI3 | ||
}} | }} |
Latest revision as of 14:56, 18 September 2015
Short description: | p1@GLI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLI3_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000437480_5end |
EntrezGene: | GLI3 |
HGNC: | 4319 |
UniProt: | F8WEV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.03e-13 | 76 |
skin fibroblast | 2.20e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.14e-15 | 99 |
integument | 1.08e-10 | 46 |
integumental system | 1.08e-10 | 46 |
skin of body | 6.38e-10 | 41 |
ectoderm-derived structure | 2.78e-09 | 171 |
ectoderm | 2.78e-09 | 171 |
presumptive ectoderm | 2.78e-09 | 171 |
organ system subdivision | 6.65e-07 | 223 |