FFCP PHASE1:Hg19::chr7:45956182..45956215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45956182..45956215,+ | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45956182..45956215,+ | |description=CAGE_peak_at_chr7:45956182..45956215,+ | ||
|id=chr7:45956182..45956215,+ | |id=chr7:45956182..45956215,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.13e-11!180;CL:0000057!2.17e-10!75;CL:0002620!1.55e-09!23;CL:0002334!4.77e-08!12;CL:0002595!5.00e-07!5 | |ontology_enrichment_celltype=CL:0000055!1.13e-11!180;CL:0000057!2.17e-10!75;CL:0002620!1.55e-09!23;CL:0002334!4.77e-08!12;CL:0002595!5.00e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.95e-22;23!CL:0002595;6.81e-15;5!CL:0000153;2.82e-12;9!CL:0000447;2.82e-12;9!CL:0002537;1.76e-09;5!CL:0000327;2.48e-09;15!CL:0000138;5.45e-09;6!CL:0002580;8.64e-09;3!CL:0002334;1.30e-07;12!CL:0000499;2.45e-07;28!CL:0002589;8.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.62e-22,23;CL:0002595,1.05e-14,5;CL:0000057,4.13e-14,76;CL:0000153,2.52e-12,9;CL:0000447,2.52e-12,9;CL:0000327,2.12e-09,15;CL:0002537,2.81e-09,5;CL:0000058,5.31e-09,6;CL:0000138,5.31e-09,6;CL:0002580,6.85e-09,3;CL:0000048,1.27e-08,427;CL:0000723,2.53e-08,433;CL:0000034,6.17e-08,441;CL:0002334,1.29e-07,12;CL:0000499,2.27e-07,28;CL:0002589,5.96e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.82e-07!5;DOID:450!4.82e-07!5;DOID:66!4.82e-07!5;DOID:423!4.82e-07!5;DOID:0080000!4.82e-07!5;DOID:11722!4.82e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.54e-14;5!DOID:450;1.54e-14;5!DOID:66;1.54e-14;5!DOID:423;1.54e-14;5!DOID:0080000;1.54e-14;5!DOID:11722;1.54e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.68e-15,5;DOID:450,9.68e-15,5;DOID:66,9.68e-15,5;DOID:423,9.68e-15,5;DOID:0080000,9.68e-15,5;DOID:11722,9.68e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.25e-08!40;UBERON:0002199!2.41e-07!45;UBERON:0002416!2.41e-07!45;UBERON:0005631!4.84e-07!14;UBERON:0000158!4.84e-07!14;UBERON:0003834!5.00e-07!5;UBERON:0001533!5.00e-07!5 | |ontology_enrichment_uberon=UBERON:0002097!3.25e-08!40;UBERON:0002199!2.41e-07!45;UBERON:0002416!2.41e-07!45;UBERON:0005631!4.84e-07!14;UBERON:0000158!4.84e-07!14;UBERON:0003834!5.00e-07!5;UBERON:0001533!5.00e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;6.81e-15;5!UBERON:0001533;6.81e-15;5!UBERON:0002097;2.64e-11;41!UBERON:0004457;7.14e-11;9!UBERON:0000042;7.14e-11;9!UBERON:0003513;1.59e-10;7!UBERON:0005631;5.84e-10;10!UBERON:0000158;5.84e-10;10!UBERON:0002199;3.11e-09;46!UBERON:0002416;3.11e-09;46!UBERON:0003688;1.42e-07;6!UBERON:0002358;1.42e-07;6!UBERON:0003684;1.42e-07;6!UBERON:0001178;1.42e-07;6!UBERON:0001529;8.69e-07;2!UBERON:0007204;8.69e-07;2!UBERON:0000305;9.13e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.05e-14,5;UBERON:0001533,1.05e-14,5;UBERON:0002097,1.69e-14,41;UBERON:0002199,1.76e-12,46;UBERON:0002416,1.76e-12,46;UBERON:0005631,1.45e-11,14;UBERON:0000158,1.45e-11,14;UBERON:0003513,2.15e-10,7;UBERON:0004457,4.61e-08,12;UBERON:0000042,4.61e-08,12;UBERON:0003688,1.16e-07,6;UBERON:0002358,1.16e-07,6;UBERON:0003684,1.16e-07,6;UBERON:0001178,1.16e-07,6;UBERON:0004923,5.49e-07,66;UBERON:0001529,5.96e-07,2;UBERON:0007204,5.96e-07,2 | |||
|phase1_expression=2.18014055124668,1.2846031433459,2.96004248601539,0,1.34088328328186,2.61701557230111,0,0,0,0.737201809504527,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91793842765295,100.480084362909,33.5896400126046,19.5542800597112,0,10.705967146658,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.113432183160021,3.22901344239952,1.92201649936711,4.4505699243508,5.40163972951924,1.54578793857658,3.86460810068444,5.95573940261087,2.36286865137773,1.55899208257918,5.04867548488229,4.69454483075727,0.323292113637624,5.68015348026583,4.53384442024381,1.01736355386293,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0.718874566474748,0,0,1.59259437334337,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,1.24782516918484,0.356857977594324,0.315404830067869,0.585707074963566,0,0,1.03473071292505,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,1.21251028578504,0,0.604780586659361,2.72918588600655,1.68808170616869,1.12264037773229,1.66580894032411,2.04682899626681,0.482561763430822,0,0,0.355123450626254,0.410635780069046,0.519254429183621,1.04589340613963,0,0,0,0.114814448164607,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0,0.267096106940212,0,0,0,0.10115778085555,0,3.46293581513704,0,0,0,0,2.96518750566272,2.71937284809783,0,0.632758849437452,0,0,0,0.95460974377781,0,0.359744915166629,0,0,0,0,0.842516912477962,0,1.21856744815642,2.11300293513511,0,0,2.26016233240486,2.2054613741845,10.6150236038595,10.5228212460903,0,0,0,0,0,0,0,0.35667105148125,0,4.64436797654861,2.63435914367922,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,4.7748896947538,2.07875276582847,2.15012491469462,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,8.70910845453061,0,0.895105873378046,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,2.23300811812344,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.195984794828755,0.34823682632161,0,1.54787429224455,0.0967563312890851,0.146178634172371,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.160317640503067,0,2.19790570540343,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0.407992870545287,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.470284307407084,2.88239906833923,0,0,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0.0524545881349981,0,0.537862017998534,0,0.714695326373367,0.662091970365432,0.5085370753095,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.470531639396343,0,0,0,0.467426619694449,0,0.378806010550178,0.754703705257725,4.44905610798268,0.228840068396924,0.604923695052956,0,0.147855149989634,0,0,0,0,0,1.04349012362347,0.300515217994437,2.28483127301277,0,0,0,0,0,0.400027764663154,0.343395705182793,1.34699795506368,0,0,0,0,0.680117776536817,0,0.244736704506468,1.25362188757041,1.23520578864389,0,0.176689145945881,0.192914038270915,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,1.03973099535304,0,0,0,0.0752103283492573,0.80682027481408,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0.078493092850514,0,0,0,6.90968291899588,19.110067515482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0.257831551894309,0,1.2498775702396,0,0.160482733378337,0,0,0,0,0,0,0,0.371995018166751,4.15958065768276,3.46101249699031,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,1.66330178273007,0.244209805832924,0.320182037633146,0,0.898252021065869,0,0.244482888365733,0.406896178315738,0.665756774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185513,0,0 | ||
|short_description=p@chr7:45956182..45956215,+ | |short_description=p@chr7:45956182..45956215,+ | ||
}} | }} |
Latest revision as of 10:26, 31 July 2015
Short description: | p@chr7:45956182..45956215, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45956182..45956215, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.62e-22 | 23 |
smooth muscle cell of the subclavian artery | 1.05e-14 | 5 |
fibroblast | 4.13e-14 | 76 |
GAG secreting cell | 2.52e-12 | 9 |
carbohydrate secreting cell | 2.52e-12 | 9 |
extracellular matrix secreting cell | 2.12e-09 | 15 |
amnion mesenchymal stem cell | 2.81e-09 | 5 |
chondroblast | 5.31e-09 | 6 |
chondrocyte | 5.31e-09 | 6 |
preadipocyte of the breast | 6.85e-09 | 3 |
multi fate stem cell | 1.27e-08 | 427 |
somatic stem cell | 2.53e-08 | 433 |
stem cell | 6.17e-08 | 441 |
preadipocyte | 1.29e-07 | 12 |
stromal cell | 2.27e-07 | 28 |
smooth muscle cell of the brachiocephalic vasculature | 5.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.05e-14 | 5 |
subclavian artery | 1.05e-14 | 5 |
skin of body | 1.69e-14 | 41 |
integument | 1.76e-12 | 46 |
integumental system | 1.76e-12 | 46 |
extraembryonic membrane | 1.45e-11 | 14 |
membranous layer | 1.45e-11 | 14 |
trunk blood vessel | 2.15e-10 | 7 |
cavity lining | 4.61e-08 | 12 |
serous membrane | 4.61e-08 | 12 |
omentum | 1.16e-07 | 6 |
peritoneum | 1.16e-07 | 6 |
abdominal cavity | 1.16e-07 | 6 |
visceral peritoneum | 1.16e-07 | 6 |
organ component layer | 5.49e-07 | 66 |
brachiocephalic artery | 5.96e-07 | 2 |
brachiocephalic vasculature | 5.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.68e-15 | 5 |
myotonic disease | 9.68e-15 | 5 |
muscle tissue disease | 9.68e-15 | 5 |
myopathy | 9.68e-15 | 5 |
muscular disease | 9.68e-15 | 5 |
myotonic dystrophy | 9.68e-15 | 5 |