FFCP PHASE1:Hg19::chr7:46608875..46608912,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:46608875..46608912,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr7:46608875..46608912,+ | |description=CAGE_peak_at_chr7:46608875..46608912,+ | ||
|id=chr7:46608875..46608912,+ | |id=chr7:46608875..46608912,+ | ||
|ontology_enrichment_celltype=CL:0002251!3.45e-12!21;CL:0002076!3.39e-11!43;CL:0000066!1.91e-10!254;CL:0000223!7.97e-09!59;CL:1000415!9.81e-09!2;CL:0002537!5.61e-08!5 | |ontology_enrichment_celltype=CL:0002251!3.45e-12!21;CL:0002076!3.39e-11!43;CL:0000066!1.91e-10!254;CL:0000223!7.97e-09!59;CL:1000415!9.81e-09!2;CL:0002537!5.61e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;8.56e-29;19!CL:0002537;1.74e-28;5!CL:0002577;4.45e-21;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.16e-29,19;CL:0002537,1.74e-28,5;CL:0002577,3.63e-21,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.73e-36!14;DOID:305!6.05e-19!106;DOID:0050687!2.46e-12!143;DOID:14566!7.72e-09!239;DOID:162!2.16e-08!235;DOID:7!2.42e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3151;8.86e-17;1!DOID:3149;8.86e-17;1!DOID:3111;2.43e-16;1!DOID:3603;2.43e-16;1!DOID:3451;4.70e-09;2!DOID:4159;4.70e-09;2!DOID:0060122;4.70e-09;2!DOID:4929;4.70e-09;2!DOID:4074;7.79e-09;2!DOID:4905;7.79e-09;2!DOID:3498;7.79e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.57e-17,1;DOID:3149,7.57e-17,1;DOID:3111,3.07e-16,1;DOID:3603,3.07e-16,1;DOID:3451,4.34e-09,2;DOID:4159,4.34e-09,2;DOID:0060122,4.34e-09,2;DOID:4929,4.70e-09,2;DOID:4074,7.49e-09,2;DOID:4905,7.49e-09,2;DOID:3498,7.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.62e-21!14;UBERON:0000158!2.62e-21!14;UBERON:0003343!1.22e-14!4;UBERON:0004785!1.22e-14!4;UBERON:0003124!1.11e-13!7;UBERON:0003729!9.79e-12!5;UBERON:0000478!1.09e-11!24;UBERON:0004923!1.67e-11!57;UBERON:0000344!2.21e-10!12;UBERON:0004119!4.60e-10!169;UBERON:0000925!4.60e-10!169;UBERON:0006595!4.60e-10!169;UBERON:0000305!1.71e-09!7;UBERON:0002294!3.59e-09!7;UBERON:0001173!3.59e-09!7;UBERON:0004912!3.59e-09!7;UBERON:0001987!3.70e-09!4;UBERON:0004340!3.70e-09!4;UBERON:0004871!2.65e-08!8;UBERON:0001007!6.72e-07!155;UBERON:0001555!6.72e-07!155;UBERON:0007026!6.72e-07!155 | |ontology_enrichment_uberon=UBERON:0005631!2.62e-21!14;UBERON:0000158!2.62e-21!14;UBERON:0003343!1.22e-14!4;UBERON:0004785!1.22e-14!4;UBERON:0003124!1.11e-13!7;UBERON:0003729!9.79e-12!5;UBERON:0000478!1.09e-11!24;UBERON:0004923!1.67e-11!57;UBERON:0000344!2.21e-10!12;UBERON:0004119!4.60e-10!169;UBERON:0000925!4.60e-10!169;UBERON:0006595!4.60e-10!169;UBERON:0000305!1.71e-09!7;UBERON:0002294!3.59e-09!7;UBERON:0001173!3.59e-09!7;UBERON:0004912!3.59e-09!7;UBERON:0001987!3.70e-09!4;UBERON:0004340!3.70e-09!4;UBERON:0004871!2.65e-08!8;UBERON:0001007!6.72e-07!155;UBERON:0001555!6.72e-07!155;UBERON:0007026!6.72e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.70e-25;10!UBERON:0000158;4.70e-25;10!UBERON:0000478;8.87e-23;24!UBERON:0000305;1.46e-20;7!UBERON:0004913;8.86e-17;1!UBERON:0003703;8.86e-17;1!UBERON:0001174;8.86e-17;1!UBERON:0004914;8.86e-17;1!UBERON:0001987;4.51e-16;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.09e-39,14;UBERON:0000158,4.09e-39,14;UBERON:0000478,8.54e-23,24;UBERON:0000305,1.46e-20,7;UBERON:0003124,3.44e-20,7;UBERON:0004871,4.43e-18,8;UBERON:0004913,8.86e-17,1;UBERON:0003703,8.86e-17,1;UBERON:0001174,8.86e-17,1;UBERON:0004914,8.86e-17,1;UBERON:0001987,3.87e-16,4;UBERON:0004340,3.87e-16,4;UBERON:0004923,6.42e-11,66 | |||
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| ||
|short_description=p@chr7:46608875..46608912,+ | |short_description=p@chr7:46608875..46608912,+ | ||
}} | }} |
Latest revision as of 10:28, 31 July 2015
Short description: | p@chr7:46608875..46608912, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:46608875..46608912, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.16e-29 | 19 |
amnion mesenchymal stem cell | 1.74e-28 | 5 |
placental epithelial cell | 3.63e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.09e-39 | 14 |
membranous layer | 4.09e-39 | 14 |
extraembryonic structure | 8.54e-23 | 24 |
amnion | 1.46e-20 | 7 |
chorion | 3.44e-20 | 7 |
somatic layer of lateral plate mesoderm | 4.43e-18 | 8 |
hepatopancreatic ampulla | 8.86e-17 | 1 |
extrahepatic bile duct | 8.86e-17 | 1 |
common bile duct | 8.86e-17 | 1 |
duodenal papilla | 8.86e-17 | 1 |
placenta | 3.87e-16 | 4 |
allantois | 3.87e-16 | 4 |
organ component layer | 6.42e-11 | 66 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.57e-17 | 1 |
keratoacanthoma | 7.57e-17 | 1 |
cystadenocarcinoma | 3.07e-16 | 1 |
mucinous cystadenocarcinoma | 3.07e-16 | 1 |
skin carcinoma | 4.34e-09 | 2 |
skin cancer | 4.34e-09 | 2 |
integumentary system cancer | 4.34e-09 | 2 |
tubular adenocarcinoma | 4.70e-09 | 2 |
pancreas adenocarcinoma | 7.49e-09 | 2 |
pancreatic carcinoma | 7.49e-09 | 2 |
pancreatic ductal adenocarcinoma | 7.49e-09 | 2 |