FFCP PHASE1:Hg19::chr8:143867355..143867390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8581 | |EntrezGene=8581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13348 | |HGNC=13348 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000518884_5end | |association_with_transcript=-7bp_to_ENST00000518884_5end | ||
|cluster_id=chr8:143867355..143867390,- | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_2_at_LY6D_5end | |description=CAGE_peak_2_at_LY6D_5end | ||
|id=chr8:143867355..143867390,- | |id=chr8:143867355..143867390,- | ||
|ontology_enrichment_celltype=CL:0002541!4.06e-10!3;CL:0000066!1.18e-09!254;CL:0002251!3.32e-09!21;CL:0000223!4.10e-07!59;CL:0000575!7.15e-07!2;CL:0002076!8.66e-07!43 | |ontology_enrichment_celltype=CL:0002541!4.06e-10!3;CL:0000066!1.18e-09!254;CL:0002251!3.32e-09!21;CL:0000223!4.10e-07!59;CL:0000575!7.15e-07!2;CL:0002076!8.66e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002541;9.38e-15;3!CL:0002537;4.97e-09;5!CL:0000349;8.02e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.39e-15,3;CL:0002537,5.28e-09,5;CL:0000349,8.27e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.78e-11;1!UBERON:0009143;3.81e-11;1 | |||
|ontology_enrichment_disease=DOID:305!7.51e-16!106;DOID:0050687!1.21e-12!143;DOID:1749!3.45e-09!14;DOID:162!7.74e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.71e-08,106;DOID:1749,5.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.66e-13!14;UBERON:0000158!9.66e-13!14;UBERON:0003124!7.99e-11!7;UBERON:0000476!4.06e-10!3;UBERON:0000920!4.06e-10!3;UBERON:0004119!2.00e-09!169;UBERON:0000925!2.00e-09!169;UBERON:0006595!2.00e-09!169;UBERON:0000166!3.82e-09!21;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0000161!3.39e-07!35;UBERON:0000077!4.09e-07!130;UBERON:0001004!5.61e-07!72;UBERON:0000478!8.36e-07!24 | |ontology_enrichment_uberon=UBERON:0005631!9.66e-13!14;UBERON:0000158!9.66e-13!14;UBERON:0003124!7.99e-11!7;UBERON:0000476!4.06e-10!3;UBERON:0000920!4.06e-10!3;UBERON:0004119!2.00e-09!169;UBERON:0000925!2.00e-09!169;UBERON:0006595!2.00e-09!169;UBERON:0000166!3.82e-09!21;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0000161!3.39e-07!35;UBERON:0000077!4.09e-07!130;UBERON:0001004!5.61e-07!72;UBERON:0000478!8.36e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.39e-16;10!UBERON:0000158;1.39e-16;10!UBERON:0003124;9.38e-15;3!UBERON:0000920;9.38e-15;3!UBERON:0000997;1.78e-11;1!UBERON:0004913;1.78e-11;1!UBERON:0005056;1.78e-11;1!UBERON:0003703;1.78e-11;1!UBERON:0004176;1.78e-11;1!UBERON:0001174;1.78e-11;1!UBERON:0004914;1.78e-11;1!UBERON:0000478;1.62e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.31e-18,14;UBERON:0000158,4.31e-18,14;UBERON:0000920,9.39e-15,3;UBERON:0003124,8.38e-14,7;UBERON:0004913,1.45e-11,1;UBERON:0003703,1.45e-11,1;UBERON:0001174,1.45e-11,1;UBERON:0004914,1.45e-11,1;UBERON:0000997,1.97e-11,1;UBERON:0005056,1.97e-11,1;UBERON:0000478,1.63e-10,24 | |||
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| ||
|short_description=p2@LY6D | |short_description=p2@LY6D | ||
}} | }} |
Latest revision as of 21:31, 16 September 2015
Short description: | p2@LY6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LY6D_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | -7bp_to_ENST00000518884_5end |
EntrezGene: | LY6D |
HGNC: | 13348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.39e-15 | 3 |
amnion mesenchymal stem cell | 5.28e-09 | 5 |
extraembryonic cell | 8.27e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.31e-18 | 14 |
membranous layer | 4.31e-18 | 14 |
egg chorion | 9.39e-15 | 3 |
chorion | 8.38e-14 | 7 |
hepatopancreatic ampulla | 1.45e-11 | 1 |
extrahepatic bile duct | 1.45e-11 | 1 |
common bile duct | 1.45e-11 | 1 |
duodenal papilla | 1.45e-11 | 1 |
mammalian vulva | 1.97e-11 | 1 |
external female genitalia | 1.97e-11 | 1 |
extraembryonic structure | 1.63e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.71e-08 | 106 |
squamous cell carcinoma | 5.68e-07 | 14 |