FFCP PHASE1:Hg19::chr3:99508318..99508344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:99508318..99508344,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr3:99508318..99508344,- | |description=CAGE_peak_at_chr3:99508318..99508344,- | ||
|id=chr3:99508318..99508344,- | |id=chr3:99508318..99508344,- | ||
|ontology_enrichment_celltype=CL:0000136!1.54e-13!15;CL:0000055!1.41e-12!180;CL:0000057!4.79e-09!75;CL:0002620!9.77e-09!23 | |ontology_enrichment_celltype=CL:0000136!1.54e-13!15;CL:0000055!1.41e-12!180;CL:0000057!4.79e-09!75;CL:0002620!9.77e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.45e-32;13!CL:0002580;1.26e-16;3!CL:0002617;2.61e-11;2!CL:0002092;9.89e-09;10!CL:0002540;1.14e-08;6!CL:0002615;2.18e-08;3!CL:0000515;7.98e-08;3!CL:0002334;2.60e-07;12!CL:0000222;8.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.34e-35,15;CL:0002580,2.46e-16,3;CL:0002617,1.24e-11,2;CL:0002092,1.37e-08,10;CL:0002540,1.54e-08,6;CL:0002615,2.31e-08,3;CL:0002334,3.26e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;4.09e-07;1!DOID:4549;4.09e-07;1!DOID:5861;4.09e-07;1!DOID:6496;4.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.09e-07,1;DOID:4549,4.09e-07,1;DOID:5861,4.09e-07,1;DOID:6496,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.23e-07!45;UBERON:0002416!5.23e-07!45 | |ontology_enrichment_uberon=UBERON:0002199!5.23e-07!45;UBERON:0002416!5.23e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.35e-13;10!UBERON:0001443;8.51e-12;11!UBERON:0003688;7.25e-09;6!UBERON:0002358;7.25e-09;6!UBERON:0003684;7.25e-09;6!UBERON:0001178;7.25e-09;6!UBERON:0001474;2.50e-07;18!UBERON:0002371;2.75e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.17e-13,10;UBERON:0001443,8.24e-12,11;UBERON:0003688,7.76e-09,6;UBERON:0002358,7.76e-09,6;UBERON:0003684,7.76e-09,6;UBERON:0001178,7.76e-09,6 | |||
|phase1_expression=1.81678379270557,1.49870366723688,4.22863212287913,0,3.5756887554183,0.872338524100369,0,0.631719873426831,1.82829939739887,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0.579386075843295,0.795285947051099,0,0.378139268656271,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56118559415519,0.286836620748814,0.354668382198357,0,0,0,2.48968828319813,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.717558542755448,1.2813443329114,1.05965950579781,0,0.515262646192195,0.515281080091258,0,0.843881661206331,0.876933046450788,0.252433774244115,1.74894807420369,0.323292113637624,0.710019185033229,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,5.21026396419431,1.07423381301644,1.12264037773229,2.43464383585832,0.511707249066704,0.965123526861645,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.732555718546747,0.907604499126468,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.580066775656914,0.0852266274161009,0,0,0,0.127612712494584,0,0.929691098594572,1.5740617341532,0,0,0,0.869932992075073,0.18532421910392,0,0.744316738719335,0,0.190630193923825,0,0.855877976067841,0,0,0.539617372749944,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.530745387020035,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,3.74421617135474,0,0,0.174118413160805,0,0,0,0,0,0.193978032976839,18.0042498450661,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,1.60412296808179,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0,1.42939065274673,0.662091970365432,0,0,0.864221491201268,0.979762080328227,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,4.35214242695579,5.013797880454,8.57767614937692,5.57383472206668,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,2.08343305802598,1.0062716070103,4.44905610798268,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0.398095888698616,1.20008329398946,1.37358282073117,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,1.1441462864015,0,0,0.0752103283492573,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,1.48798007266701,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.358611026963382,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.805095174364105,0 | |phase1_expression=1.81678379270557,1.49870366723688,4.22863212287913,0,3.5756887554183,0.872338524100369,0,0.631719873426831,1.82829939739887,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0.579386075843295,0.795285947051099,0,0.378139268656271,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56118559415519,0.286836620748814,0.354668382198357,0,0,0,2.48968828319813,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.717558542755448,1.2813443329114,1.05965950579781,0,0.515262646192195,0.515281080091258,0,0.843881661206331,0.876933046450788,0.252433774244115,1.74894807420369,0.323292113637624,0.710019185033229,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.315404830067869,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,5.21026396419431,1.07423381301644,1.12264037773229,2.43464383585832,0.511707249066704,0.965123526861645,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.732555718546747,0.907604499126468,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.580066775656914,0.0852266274161009,0,0,0,0.127612712494584,0,0.929691098594572,1.5740617341532,0,0,0,0.869932992075073,0.18532421910392,0,0.744316738719335,0,0.190630193923825,0,0.855877976067841,0,0,0.539617372749944,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.530745387020035,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,3.74421617135474,0,0,0.174118413160805,0,0,0,0,0,0.193978032976839,18.0042498450661,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,1.60412296808179,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.316801009558219,0,0,1.42939065274673,0.662091970365432,0,0,0.864221491201268,0.979762080328227,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,4.35214242695579,5.013797880454,8.57767614937692,5.57383472206668,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,2.08343305802598,1.0062716070103,4.44905610798268,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0.398095888698616,1.20008329398946,1.37358282073117,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,1.1441462864015,0,0,0.0752103283492573,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0.245148321753905,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,1.48798007266701,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.358611026963382,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.805095174364105,0 | ||
|short_description=p@chr3:99508318..99508344,- | |short_description=p@chr3:99508318..99508344,- | ||
}} | }} |
Latest revision as of 00:12, 30 July 2015
Short description: | p@chr3:99508318..99508344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:99508318..99508344, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.34e-35 | 15 |
preadipocyte of the breast | 2.46e-16 | 3 |
adipocyte of breast | 1.24e-11 | 2 |
bone marrow cell | 1.37e-08 | 10 |
mesenchymal stem cell of the bone marrow | 1.54e-08 | 6 |
adipocyte of omentum tissue | 2.31e-08 | 3 |
preadipocyte | 3.26e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
breast | 5.17e-13 | 10 |
chest | 8.24e-12 | 11 |
omentum | 7.76e-09 | 6 |
peritoneum | 7.76e-09 | 6 |
abdominal cavity | 7.76e-09 | 6 |
visceral peritoneum | 7.76e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.09e-07 | 1 |
extraosseous chondrosarcoma | 4.09e-07 | 1 |
myxoid chondrosarcoma | 4.09e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 4.09e-07 | 1 |