FFCP PHASE1:Hg19::chr4:152148941..152148953,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152503 | |EntrezGene=152503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30418 | |HGNC=30418 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=115bp_to_ENST00000514013_5end | |association_with_transcript=115bp_to_ENST00000514013_5end | ||
|cluster_id=chr4:152148941..152148953,- | |||
|coexpression_cluster_id=C2779 | |||
|description=CAGE_peak_3_at_SH3D19_5end | |description=CAGE_peak_3_at_SH3D19_5end | ||
|id=chr4:152148941..152148953,- | |id=chr4:152148941..152148953,- | ||
|ontology_enrichment_celltype=CL:0002139!2.12e-15!24;CL:0000222!3.40e-14!119;CL:0000136!4.98e-12!15;CL:0000071!1.64e-11!18;CL:0002546!1.64e-11!18;CL:0000115!4.18e-10!35;CL:0000680!1.46e-09!57;CL:0000056!1.46e-09!57;CL:0000355!1.46e-09!57;CL:0000057!7.57e-09!75;CL:0000187!1.24e-08!54;CL:0002078!1.37e-08!44;CL:0000055!1.62e-08!180;CL:0002334!2.13e-08!12;CL:0000220!8.19e-08!246;CL:0002321!1.58e-07!248;CL:0000183!1.85e-07!59;CL:1000413!2.32e-07!9;CL:0000213!3.17e-07!57;CL:0000215!3.17e-07!57 | |ontology_enrichment_celltype=CL:0002139!2.12e-15!24;CL:0000222!3.40e-14!119;CL:0000136!4.98e-12!15;CL:0000071!1.64e-11!18;CL:0002546!1.64e-11!18;CL:0000115!4.18e-10!35;CL:0000680!1.46e-09!57;CL:0000056!1.46e-09!57;CL:0000355!1.46e-09!57;CL:0000057!7.57e-09!75;CL:0000187!1.24e-08!54;CL:0002078!1.37e-08!44;CL:0000055!1.62e-08!180;CL:0002334!2.13e-08!12;CL:0000220!8.19e-08!246;CL:0002321!1.58e-07!248;CL:0000183!1.85e-07!59;CL:1000413!2.32e-07!9;CL:0000213!3.17e-07!57;CL:0000215!3.17e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.25e-22;24!CL:0000071;4.68e-16;18!CL:0000136;4.87e-14;13!CL:0000115;6.71e-12;36!CL:1000413;1.29e-10;9!CL:0002334;2.86e-10;12!CL:0002078;2.59e-09;45!CL:0002138;8.83e-08;6!CL:0002595;2.59e-07;5!CL:0002544;4.13e-07;6!CL:0000213;8.53e-07;58!CL:0000215;8.53e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.35e-23,24;CL:0000071,1.51e-16,18;CL:0002546,1.51e-16,18;CL:0000115,3.77e-14,36;CL:0000136,1.45e-13,15;CL:0002078,2.32e-13,45;CL:0000222,2.73e-12,121;CL:1000413,4.02e-11,9;CL:0000213,9.74e-11,58;CL:0000215,9.74e-11,58;CL:0002334,5.77e-10,12;CL:0002321,7.93e-10,250;CL:0005020,5.33e-08,6;CL:0002138,5.33e-08,6;CL:0005022,5.33e-08,6;CL:0002544,1.07e-07,6;CL:0002595,6.04e-07,5;CL:0000076,6.22e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;4.68e-16;18!CL:0005022;8.83e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.60e-16!69;UBERON:0004872!5.25e-16!84;UBERON:0002049!9.03e-16!79;UBERON:0007798!9.03e-16!79;UBERON:0001981!2.12e-14!60;UBERON:0007500!2.12e-14!60;UBERON:0004537!2.12e-14!60;UBERON:0006965!2.12e-14!60;UBERON:0001009!1.11e-13!113;UBERON:0004535!1.46e-13!110;UBERON:0000486!6.11e-12!82;UBERON:0000914!6.40e-12!83;UBERON:0002329!6.40e-12!83;UBERON:0003077!6.40e-12!83;UBERON:0003059!6.40e-12!83;UBERON:0007282!6.40e-12!83;UBERON:0009618!6.40e-12!83;UBERON:0007285!6.40e-12!83;UBERON:0001986!1.64e-11!18;UBERON:0004638!1.64e-11!18;UBERON:0004852!1.64e-11!18;UBERON:0004573!5.69e-11!33;UBERON:0004571!5.69e-11!33;UBERON:0003914!5.91e-11!118;UBERON:0001637!4.51e-10!42;UBERON:0003509!4.51e-10!42;UBERON:0004572!4.51e-10!42;UBERON:0000490!5.14e-10!138;UBERON:0002385!7.14e-10!63;UBERON:0001015!7.14e-10!63;UBERON:0000383!7.14e-10!63;UBERON:0000468!1.54e-09!659;UBERON:0001134!1.71e-09!61;UBERON:0002036!1.71e-09!61;UBERON:0003082!1.71e-09!61;UBERON:0004290!2.51e-09!70;UBERON:0006914!1.06e-08!25;UBERON:0002100!1.27e-08!216;UBERON:0000487!3.73e-08!22;UBERON:0000947!9.18e-08!21;UBERON:0010191!9.18e-08!21;UBERON:0000467!1.20e-07!625;UBERON:0000119!1.43e-07!312;UBERON:0000480!1.55e-07!626;UBERON:0003915!2.32e-07!9;UBERON:0004700!2.32e-07!9;UBERON:0001917!2.32e-07!9;UBERON:0000483!3.03e-07!309;UBERON:0000475!4.26e-07!365;UBERON:0004111!4.59e-07!241;UBERON:0000477!8.93e-07!286 | |ontology_enrichment_uberon=UBERON:0000055!3.60e-16!69;UBERON:0004872!5.25e-16!84;UBERON:0002049!9.03e-16!79;UBERON:0007798!9.03e-16!79;UBERON:0001981!2.12e-14!60;UBERON:0007500!2.12e-14!60;UBERON:0004537!2.12e-14!60;UBERON:0006965!2.12e-14!60;UBERON:0001009!1.11e-13!113;UBERON:0004535!1.46e-13!110;UBERON:0000486!6.11e-12!82;UBERON:0000914!6.40e-12!83;UBERON:0002329!6.40e-12!83;UBERON:0003077!6.40e-12!83;UBERON:0003059!6.40e-12!83;UBERON:0007282!6.40e-12!83;UBERON:0009618!6.40e-12!83;UBERON:0007285!6.40e-12!83;UBERON:0001986!1.64e-11!18;UBERON:0004638!1.64e-11!18;UBERON:0004852!1.64e-11!18;UBERON:0004573!5.69e-11!33;UBERON:0004571!5.69e-11!33;UBERON:0003914!5.91e-11!118;UBERON:0001637!4.51e-10!42;UBERON:0003509!4.51e-10!42;UBERON:0004572!4.51e-10!42;UBERON:0000490!5.14e-10!138;UBERON:0002385!7.14e-10!63;UBERON:0001015!7.14e-10!63;UBERON:0000383!7.14e-10!63;UBERON:0000468!1.54e-09!659;UBERON:0001134!1.71e-09!61;UBERON:0002036!1.71e-09!61;UBERON:0003082!1.71e-09!61;UBERON:0004290!2.51e-09!70;UBERON:0006914!1.06e-08!25;UBERON:0002100!1.27e-08!216;UBERON:0000487!3.73e-08!22;UBERON:0000947!9.18e-08!21;UBERON:0010191!9.18e-08!21;UBERON:0000467!1.20e-07!625;UBERON:0000119!1.43e-07!312;UBERON:0000480!1.55e-07!626;UBERON:0003915!2.32e-07!9;UBERON:0004700!2.32e-07!9;UBERON:0001917!2.32e-07!9;UBERON:0000483!3.03e-07!309;UBERON:0000475!4.26e-07!365;UBERON:0004111!4.59e-07!241;UBERON:0000477!8.93e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.68e-16;18!UBERON:0001986;4.68e-16;18!UBERON:0004852;4.68e-16;18!UBERON:0006914;2.81e-13;25!UBERON:0000487;2.94e-12;22!UBERON:0003915;1.29e-10;9!UBERON:0004700;1.29e-10;9!UBERON:0001917;1.29e-10;9!UBERON:0004457;2.67e-10;9!UBERON:0000042;2.67e-10;9!UBERON:0003688;5.55e-10;6!UBERON:0002358;5.55e-10;6!UBERON:0003684;5.55e-10;6!UBERON:0001178;5.55e-10;6!UBERON:0004573;2.89e-08;33!UBERON:0004571;2.89e-08;33!UBERON:0000055;3.85e-08;65!UBERON:0000490;5.54e-08;33!UBERON:0001637;1.10e-07;42!UBERON:0003509;1.10e-07;42!UBERON:0004572;1.10e-07;42!UBERON:0007500;1.30e-07;56!UBERON:0001981;1.30e-07;56!UBERON:0004537;1.30e-07;56!UBERON:0003834;2.59e-07;5!UBERON:0001533;2.59e-07;5 | |||
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| ||
|short_description=p3@SH3D19 | |short_description=p3@SH3D19 | ||
}} | }} |
Latest revision as of 02:35, 16 September 2015
Short description: | p3@SH3D19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3D19_5end |
Coexpression cluster: | C2779_Adipocyte_mature_adipose_Preadipocyte_Fibroblast_Mesenchymal_Hair |
Association with transcript: | 115bp_to_ENST00000514013_5end |
EntrezGene: | SH3D19 |
HGNC: | 30418 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.35e-23 | 24 |
blood vessel endothelial cell | 1.51e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.51e-16 | 18 |
endothelial cell | 3.77e-14 | 36 |
fat cell | 1.45e-13 | 15 |
meso-epithelial cell | 2.32e-13 | 45 |
mesodermal cell | 2.73e-12 | 121 |
endothelial cell of artery | 4.02e-11 | 9 |
lining cell | 9.74e-11 | 58 |
barrier cell | 9.74e-11 | 58 |
preadipocyte | 5.77e-10 | 12 |
embryonic cell | 7.93e-10 | 250 |
lymphangioblast | 5.33e-08 | 6 |
endothelial cell of lymphatic vessel | 5.33e-08 | 6 |
vascular lymphangioblast | 5.33e-08 | 6 |
aortic endothelial cell | 1.07e-07 | 6 |
smooth muscle cell of the subclavian artery | 6.04e-07 | 5 |
squamous epithelial cell | 6.22e-07 | 63 |