FFCP PHASE1:Hg19::chr16:10652935..10652949,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:10652935..10652949,-
|short_description=p9@EMP2
|description=CAGE_peak_9_at_EMP2_5end
|association_with_transcript=61bp_to_ENST00000536829_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2013 | |EntrezGene=2013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3334 | |HGNC=3334 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000536829_5end | |||
|cluster_id=chr16:10652935..10652949,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_EMP2_5end | |||
|id=chr16:10652935..10652949,- | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0002559;2.91e-11;5!CL:0000148;1.09e-09;10!CL:0000346;7.29e-09;3!CL:1000428;7.29e-09;3!CL:0002567;7.29e-09;3!CL:0000182;1.24e-08;12!CL:0000147;5.94e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,2.86e-11,5;CL:0000148,7.86e-10,10;CL:0000541,7.86e-10,10;CL:0002567,4.32e-09,3;CL:0000346,7.30e-09,3;CL:1000428,7.30e-09,3;CL:0000182,1.44e-08,12;CL:0000333,8.98e-08,41;CL:0000147,4.73e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,4.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.15e-08!45;UBERON:0002416!3.15e-08!45;UBERON:0000475!7.96e-08!365;UBERON:0003102!1.02e-07!95;UBERON:0002097!8.84e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.63e-11;19!UBERON:0006925;1.63e-11;19!UBERON:0002073;2.91e-11;5!UBERON:0000412;7.29e-09;3!UBERON:0001992;7.29e-09;3!UBERON:0002423;1.31e-08;25!UBERON:0007195;9.39e-08;1!UBERON:0002365;7.10e-07;31!UBERON:0002330;7.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.79e-11,19;UBERON:0006925,1.79e-11,19;UBERON:0008836,1.79e-11,19;UBERON:0002073,2.86e-11,5;UBERON:0005086,2.86e-11,5;UBERON:0008835,7.89e-10,22;UBERON:0003894,7.89e-10,22;UBERON:0009854,2.24e-09,23;UBERON:0000412,7.30e-09,3;UBERON:0001992,7.30e-09,3;UBERON:0007499,1.41e-08,25;UBERON:0009497,1.41e-08,25;UBERON:0000015,1.41e-08,25;UBERON:0002423,1.41e-08,25;UBERON:0006235,1.41e-08,25;UBERON:0004161,1.41e-08,25;UBERON:0009856,3.17e-08,26;UBERON:0007195,1.03e-07,1;UBERON:0002365,8.39e-07,31;UBERON:0002330,8.39e-07,31 | |||
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| ||
|short_description=p9@EMP2 | |||
}} | }} |
Latest revision as of 04:27, 20 September 2015
Short description: | p9@EMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EMP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 61bp_to_ENST00000536829_5end |
EntrezGene: | EMP2 |
HGNC: | 3334 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 2.86e-11 | 5 |
melanocyte | 7.86e-10 | 10 |
melanoblast | 7.86e-10 | 10 |
light melanocyte | 4.32e-09 | 3 |
hair follicle dermal papilla cell | 7.30e-09 | 3 |
stem cell of epidermis | 7.30e-09 | 3 |
hepatocyte | 1.44e-08 | 12 |
migratory neural crest cell | 8.98e-08 | 41 |
pigment cell | 4.73e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
liver | 1.79e-11 | 19 |
digestive gland | 1.79e-11 | 19 |
liver bud | 1.79e-11 | 19 |
hair follicle | 2.86e-11 | 5 |
hair follicle placode | 2.86e-11 | 5 |
hepatic diverticulum | 7.89e-10 | 22 |
liver primordium | 7.89e-10 | 22 |
digestive tract diverticulum | 2.24e-09 | 23 |
dermal papilla | 7.30e-09 | 3 |
papillary layer of dermis | 7.30e-09 | 3 |
epithelial sac | 1.41e-08 | 25 |
epithelium of foregut-midgut junction | 1.41e-08 | 25 |
anatomical boundary | 1.41e-08 | 25 |
hepatobiliary system | 1.41e-08 | 25 |
foregut-midgut junction | 1.41e-08 | 25 |
septum transversum | 1.41e-08 | 25 |
sac | 3.17e-08 | 26 |
stroma of bone marrow | 1.03e-07 | 1 |
exocrine gland | 8.39e-07 | 31 |
exocrine system | 8.39e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.90e-07 | 1 |