FFCP PHASE1:Hg19::chr9:128246806..128246820,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79109 | |EntrezGene=79109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18752 | |HGNC=18752 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000444226_5end | |association_with_transcript=-26bp_to_ENST00000444226_5end | ||
|cluster_id=chr9:128246806..128246820,- | |||
|coexpression_cluster_id=C1769 | |||
|description=CAGE_peak_9_at_MAPKAP1_5end | |description=CAGE_peak_9_at_MAPKAP1_5end | ||
|id=chr9:128246806..128246820,- | |id=chr9:128246806..128246820,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002603;4.00e-10;3!CL:0002504;1.46e-09;3!CL:1000279;1.46e-09;3!CL:1000280;1.46e-09;3!CL:0002599;4.25e-08;1!CL:0002601;8.68e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,4.79e-10,3;CL:0002504,1.12e-09,3;CL:1000279,1.12e-09,3;CL:1000280,1.12e-09,3;CL:0002599,3.11e-08,1;CL:0002601,1.21e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.25e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.42e-10;3!DOID:127;2.42e-10;3!DOID:0060072;5.80e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.42e-10,3;DOID:127,2.42e-10,3;DOID:0060072,5.80e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.43e-08!35;UBERON:0001046!4.01e-07!19;UBERON:0000160!8.31e-07!27 | |ontology_enrichment_uberon=UBERON:0005409!5.43e-08!35;UBERON:0001046!4.01e-07!19;UBERON:0000160!8.31e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.04e-12;17!UBERON:0005409;7.76e-10;22!UBERON:0000059;8.39e-10;11!UBERON:0000995;8.57e-10;17!UBERON:0003975;3.09e-09;18!UBERON:0004921;2.95e-08;33!UBERON:0004175;6.96e-08;21!UBERON:0006834;8.68e-08;1!UBERON:0000922;3.82e-07;49!UBERON:0001155;5.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.67e-13,17;UBERON:0005409,1.07e-11,25;UBERON:0000059,7.82e-10,11;UBERON:0000995,7.61e-08,21;UBERON:0006834,9.29e-08,1;UBERON:0005795,1.77e-07,22;UBERON:0003975,1.77e-07,22;UBERON:0001155,5.03e-07,9 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,2.09305798730539,0,5.32873026512749,0.85870796139317,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.869079113764942,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.412210116953756,0.257640540045629,0,0,0,0,0.552299391853796,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0.68888668898764,0.182091168006717,6.81846957789005,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,2.1396949401696,0,0,1.79872457583315,1.64722217841633,0.824686816419805,0,0,0,2.92580243453754,0,0,0.272999822815972,0.848432591722276,0,0,0,0,0,5.24715801637306,0,0,0,0,0,0,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,1.22206028986725,0,0.123563938946503,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,1.32930774541437,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.873633341210151,0.171986032471617,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0,0,0.662091970365432,0,18.4619864596262,0,4.57222304153173,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.72022758707021,0.998361463831671,0.683060432355218,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.537266523244462,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,12.560124834326,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0.111231401892069,0.470958557103084,0,0,10.0447459256045,0,0,0,0,0.116241425368125,0,19.2410727535261,0,0,0,0,0,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0,0.308696632431779,2.40415516554353,0,1.47088993052343,0,0.196308467114945,0.891139200981258,0,0,0.469919589899268,2.51385763096951,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0.50141507858475,0.454672189309436,0.267964130156178,0,0.103432995861895,0,0.714193294391221,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,2.66128285236811,0,0,0,0,2.34640942403454,1.34465588601153,0.406896178315738,0.665756774185513,0,0.320568492303233 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,2.09305798730539,0,5.32873026512749,0.85870796139317,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.869079113764942,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.412210116953756,0.257640540045629,0,0,0,0,0.552299391853796,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0.68888668898764,0.182091168006717,6.81846957789005,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,2.1396949401696,0,0,1.79872457583315,1.64722217841633,0.824686816419805,0,0,0,2.92580243453754,0,0,0.272999822815972,0.848432591722276,0,0,0,0,0,5.24715801637306,0,0,0,0,0,0,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,3.92446318369365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,1.22206028986725,0,0.123563938946503,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,1.32930774541437,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.873633341210151,0.171986032471617,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.104909176269996,0,0,0,0,0.662091970365432,0,18.4619864596262,0,4.57222304153173,0,0,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.72022758707021,0.998361463831671,0.683060432355218,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.537266523244462,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,12.560124834326,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0.111231401892069,0.470958557103084,0,0,10.0447459256045,0,0,0,0,0.116241425368125,0,19.2410727535261,0,0,0,0,0,0.255640214277473,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0,0.308696632431779,2.40415516554353,0,1.47088993052343,0,0.196308467114945,0.891139200981258,0,0,0.469919589899268,2.51385763096951,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,1.5870805215462,0,0,0,0,0,0,0.101988829741982,0,0,0.50141507858475,0.454672189309436,0.267964130156178,0,0.103432995861895,0,0.714193294391221,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,2.66128285236811,0,0,0,0,2.34640942403454,1.34465588601153,0.406896178315738,0.665756774185513,0,0.320568492303233 | ||
|short_description=p9@MAPKAP1 | |short_description=p9@MAPKAP1 | ||
}} | }} |
Latest revision as of 01:59, 25 September 2015
Short description: | p9@MAPKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MAPKAP1_5end |
Coexpression cluster: | C1769_sacrococcigeal_rectum_leiomyoma_Prostate_smooth_small_Smooth |
Association with transcript: | -26bp_to_ENST00000444226_5end |
EntrezGene: | MAPKAP1 |
HGNC: | 18752 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 4.79e-10 | 3 |
enteric smooth muscle cell | 1.12e-09 | 3 |
smooth muscle cell of large intestine | 1.12e-09 | 3 |
smooth muscle cell of colon | 1.12e-09 | 3 |
smooth muscle cell of the esophagus | 3.11e-08 | 1 |
uterine smooth muscle cell | 1.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.67e-13 | 17 |
gastrointestinal system | 1.07e-11 | 25 |
large intestine | 7.82e-10 | 11 |
uterus | 7.61e-08 | 21 |
uterus or analog | 9.29e-08 | 1 |
embryonic uterus | 1.77e-07 | 22 |
internal female genitalia | 1.77e-07 | 22 |
colon | 5.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.42e-10 | 3 |
leiomyoma | 2.42e-10 | 3 |
benign neoplasm | 5.80e-08 | 4 |