FFCP PHASE1:Hg19::chr4:165798298..165798312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_uc003iqv.1_5end | |association_with_transcript=-23bp_to_uc003iqv.1_5end | ||
|cluster_id=chr4:165798298..165798312,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_uc003iqv.1_5end | |description=CAGE_peak_3_at_uc003iqv.1_5end | ||
|id=chr4:165798298..165798312,+ | |id=chr4:165798298..165798312,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.49e-28!5;CL:0000039!2.75e-12!7;CL:0000586!2.75e-12!7;CL:0000540!5.07e-09!6;CL:0000031!5.07e-09!6;CL:0000404!5.07e-09!6;CL:0000047!7.30e-07!8 | |ontology_enrichment_celltype=CL:0002322!2.49e-28!5;CL:0000039!2.75e-12!7;CL:0000586!2.75e-12!7;CL:0000540!5.07e-09!6;CL:0000031!5.07e-09!6;CL:0000404!5.07e-09!6;CL:0000047!7.30e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.40e-63;5!CL:0002321;4.58e-21;15!CL:0000540;1.77e-19;6!CL:0000404;1.77e-19;6!CL:0000148;5.70e-12;10!CL:0000147;1.05e-08;14!CL:0000039;6.87e-08;7!CL:0000586;6.87e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.01e-63,5;CL:0000540,1.82e-19,6;CL:0000031,1.82e-19,6;CL:0000404,1.82e-19,6;CL:0000047,9.21e-15,8;CL:0000148,5.60e-12,10;CL:0000541,5.60e-12,10;CL:0000147,1.03e-08,14;CL:0000039,6.99e-08,7;CL:0000586,6.99e-08,7;CL:0000133,4.24e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.77e-19;6 | |||
|ontology_enrichment_disease=DOID:3095!3.55e-14!22;DOID:2994!3.55e-14!22;DOID:1192!6.05e-08!3;DOID:178!6.08e-07!1;DOID:326!6.08e-07!1;DOID:3978!6.08e-07!1;DOID:3394!6.08e-07!1;DOID:5844!6.08e-07!1 | |ontology_enrichment_disease=DOID:3095!3.55e-14!22;DOID:2994!3.55e-14!22;DOID:1192!6.05e-08!3;DOID:178!6.08e-07!1;DOID:326!6.08e-07!1;DOID:3978!6.08e-07!1;DOID:3394!6.08e-07!1;DOID:5844!6.08e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:178;8.05e-14;1!DOID:326;8.05e-14;1!DOID:3978;8.05e-14;1!DOID:3394;8.05e-14;1!DOID:5844;8.05e-14;1!DOID:114;1.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,7.55e-14,1;DOID:326,7.55e-14,1;DOID:3978,7.55e-14,1;DOID:3394,7.55e-14,1;DOID:5844,7.55e-14,1;DOID:114,1.45e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.16e-09;49!UBERON:0000473;5.22e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.30e-07,8 | |||
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|short_description=p3@uc003iqv.1 | |short_description=p3@uc003iqv.1 | ||
}} | }} |
Latest revision as of 03:00, 30 July 2015
Short description: | p3@uc003iqv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003iqv.1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -23bp_to_uc003iqv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.01e-63 | 5 |
neuron | 1.82e-19 | 6 |
neuroblast | 1.82e-19 | 6 |
electrically signaling cell | 1.82e-19 | 6 |
neuronal stem cell | 9.21e-15 | 8 |
melanocyte | 5.60e-12 | 10 |
melanoblast | 5.60e-12 | 10 |
pigment cell | 1.03e-08 | 14 |
germ line cell | 6.99e-08 | 7 |
germ cell | 6.99e-08 | 7 |
neurectodermal cell | 4.24e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 5.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 7.55e-14 | 1 |
ischemia | 7.55e-14 | 1 |
extrinsic cardiomyopathy | 7.55e-14 | 1 |
myocardial ischemia | 7.55e-14 | 1 |
myocardial infarction | 7.55e-14 | 1 |
heart disease | 1.45e-07 | 2 |