FFCP PHASE1:Hg19::chr4:24801371..24801405,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6649 | |EntrezGene=6649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11181 | |HGNC=11181 | ||
|TSSclassifier=strong | |||
|UniProt=P08294 | |UniProt=P08294 | ||
|association_with_transcript=227bp_to_CR541853_5end | |association_with_transcript=227bp_to_CR541853_5end | ||
|cluster_id=chr4:24801371..24801405,+ | |||
|description=CAGE_peak_4_at_SOD3_5end | |description=CAGE_peak_4_at_SOD3_5end | ||
|id=chr4:24801371..24801405,+ | |id=chr4:24801371..24801405,+ | ||
|ontology_enrichment_celltype=CL:0000136!7.07e-09!15 | |ontology_enrichment_celltype=CL:0000136!7.07e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.44e-18;13!CL:0002561;2.76e-11;2!CL:0002617;2.76e-11;2!CL:0002559;1.02e-09;5!CL:0002615;1.52e-07;3!CL:0002579;1.52e-07;3!CL:0000511;8.55e-07;1!CL:0002625;8.55e-07;1!CL:0000216;8.55e-07;1!CL:0002334;9.20e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.11e-15,15;CL:0002561,2.09e-11,2;CL:0002617,3.50e-11,2;CL:0002559,8.33e-10,5;CL:0002579,8.93e-08,3;CL:0002615,1.53e-07,3;CL:0002334,6.84e-07,12;CL:0000511,9.30e-07,1;CL:0002625,9.30e-07,1;CL:0000216,9.30e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;8.55e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.47e-19!115;UBERON:0003688!1.07e-09!6;UBERON:0002358!1.07e-09!6;UBERON:0003684!1.07e-09!6;UBERON:0001178!1.07e-09!6;UBERON:0004457!9.83e-09!12;UBERON:0000042!9.83e-09!12;UBERON:0004458!6.20e-07!49;UBERON:0002323!7.12e-07!46 | |ontology_enrichment_uberon=UBERON:0007023!9.47e-19!115;UBERON:0003688!1.07e-09!6;UBERON:0002358!1.07e-09!6;UBERON:0003684!1.07e-09!6;UBERON:0001178!1.07e-09!6;UBERON:0004457!9.83e-09!12;UBERON:0000042!9.83e-09!12;UBERON:0004458!6.20e-07!49;UBERON:0002323!7.12e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.99e-13;6!UBERON:0002358;1.99e-13;6!UBERON:0003684;1.99e-13;6!UBERON:0001178;1.99e-13;6!UBERON:0003135;5.27e-12;11!UBERON:0005933;2.76e-11;2!UBERON:0005942;2.76e-11;2!UBERON:0005406;2.76e-11;2!UBERON:0005932;2.76e-11;2!UBERON:0000473;7.15e-11;8!UBERON:0002073;1.02e-09;5!UBERON:0004457;5.43e-09;9!UBERON:0000042;5.43e-09;9!UBERON:0000310;3.01e-08;10!UBERON:0001443;1.67e-07;11!UBERON:0000989;8.55e-07;1!UBERON:0001136;8.55e-07;1!UBERON:0001343;8.55e-07;1!UBERON:0008811;8.55e-07;1!UBERON:0004910;8.55e-07;1!UBERON:0004813;8.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-13,6;UBERON:0002358,1.18e-13,6;UBERON:0003684,1.18e-13,6;UBERON:0001178,1.18e-13,6;UBERON:0003135,4.12e-12,11;UBERON:0005406,1.99e-11,2;UBERON:0005933,2.09e-11,2;UBERON:0005942,2.09e-11,2;UBERON:0005932,2.09e-11,2;UBERON:0000473,5.37e-11,8;UBERON:0002073,8.33e-10,5;UBERON:0005086,8.33e-10,5;UBERON:0000310,3.17e-08,10;UBERON:0001443,1.75e-07,11;UBERON:0004457,7.17e-07,12;UBERON:0000042,7.17e-07,12;UBERON:0000989,8.81e-07,1;UBERON:0008811,8.81e-07,1;UBERON:0006258,8.81e-07,1;UBERON:0005876,8.81e-07,1;UBERON:0004874,8.81e-07,1;UBERON:0001136,9.30e-07,1;UBERON:0001343,9.30e-07,1;UBERON:0004910,9.30e-07,1;UBERON:0005154,9.30e-07,1;UBERON:0005295,9.30e-07,1;UBERON:0004813,9.30e-07,1;UBERON:0005297,9.30e-07,1;UBERON:0005294,9.30e-07,1;UBERON:0010141,9.30e-07,1;UBERON:0005891,9.30e-07,1 | |||
|phase1_expression=1.2717486548939,2.14100523890983,1.9733616573436,1.0007329835313,0.893922188854576,2.61701557230111,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,2.43317435151318,0.0945348171640679,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,1.23633464639278,0,0,0,0,0,0,0,0.751190294532984,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.368199594569197,0.969876340912871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0.473107245101804,1.52283839490527,0,2.27407504055985,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,1.24053903909388,0,0.841980283299221,1.53766979106841,1.53512174720011,0.965123526861645,1.48418066444991,0,0,0,0,0,0,0,0,0,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.59022384726391,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.30815439456455,0,0,0,0.108647371922008,0.31900115973192,0.915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0.199679000498991,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.577000469484979,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0,0.496166021811951,0,0,0,0,1.0027595760908,0.612691153526923,0.655745261419609,0,0,0,0,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.627944742804112,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0.447421727191169,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0.980593287015622,0,0.588925401344836,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0.0802413666891683,0,0,0,0,0,0,1.0580536810308,0,0.462175628631418,0,0,0.109265571963696,0.126698501011437,0,0,0,0,5.53184496993148,3.7514978221865,0,0,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0.445530107947154,0.404234377916439,0.217716747896961,0,0,0.502055437748735,1.33064142618405,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.603821380773079,0 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|phase1_expression=1.2717486548939,2.14100523890983,1.9733616573436,1.0007329835313,0.893922188854576,2.61701557230111,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,2.43317435151318,0.0945348171640679,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,1.23633464639278,0,0,0,0,0,0,0,0.751190294532984,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.368199594569197,0.969876340912871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.713715955188647,0.473107245101804,1.52283839490527,0,2.27407504055985,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,1.24053903909388,0,0.841980283299221,1.53766979106841,1.53512174720011,0.965123526861645,1.48418066444991,0,0,0,0,0,0,0,0,0,0.364182336013434,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.59022384726391,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.30815439456455,0,0,0,0.108647371922008,0.31900115973192,0.915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0.199679000498991,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.577000469484979,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.640724475406168,0.157204305099666,0,0.496166021811951,0,0,0,0,1.0027595760908,0.612691153526923,0.655745261419609,0,0,0,0,0,0.443716206147409,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.627944742804112,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0.447421727191169,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0.980593287015622,0,0.588925401344836,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0.0802413666891683,0,0,0,0,0,0,1.0580536810308,0,0.462175628631418,0,0,0.109265571963696,0.126698501011437,0,0,0,0,5.53184496993148,3.7514978221865,0,0,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0.445530107947154,0.404234377916439,0.217716747896961,0,0,0.502055437748735,1.33064142618405,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.603821380773079,0 | ||
|short_description=p4@SOD3 | |short_description=p4@SOD3 | ||
}} | }} |
Latest revision as of 10:09, 17 September 2015
Short description: | p4@SOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SOD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 227bp_to_CR541853_5end |
EntrezGene: | SOD3 |
HGNC: | 11181 |
UniProt: | P08294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.11e-15 | 15 |
outer root sheath cell | 2.09e-11 | 2 |
adipocyte of breast | 3.50e-11 | 2 |
hair follicle cell | 8.33e-10 | 5 |
omentum preadipocyte | 8.93e-08 | 3 |
adipocyte of omentum tissue | 1.53e-07 | 3 |
preadipocyte | 6.84e-07 | 12 |
androgen binding protein secreting cell | 9.30e-07 | 1 |
seminiferous tubule epithelial cell | 9.30e-07 | 1 |
Sertoli cell | 9.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.18e-13 | 6 |
peritoneum | 1.18e-13 | 6 |
abdominal cavity | 1.18e-13 | 6 |
visceral peritoneum | 1.18e-13 | 6 |
male reproductive organ | 4.12e-12 | 11 |
perirenal fat | 1.99e-11 | 2 |
hair root sheath | 2.09e-11 | 2 |
hair outer root sheath | 2.09e-11 | 2 |
bulb of hair follicle | 2.09e-11 | 2 |
testis | 5.37e-11 | 8 |
hair follicle | 8.33e-10 | 5 |
hair follicle placode | 8.33e-10 | 5 |
breast | 3.17e-08 | 10 |
chest | 1.75e-07 | 11 |
cavity lining | 7.17e-07 | 12 |
serous membrane | 7.17e-07 | 12 |
penis | 8.81e-07 | 1 |
intromittent organ | 8.81e-07 | 1 |
lateral plate mesenchyme | 8.81e-07 | 1 |
undifferentiated genital tubercle | 8.81e-07 | 1 |
somatopleure | 8.81e-07 | 1 |
mesothelium | 9.30e-07 | 1 |
seminiferous tubule of testis | 9.30e-07 | 1 |
epithelium of male gonad | 9.30e-07 | 1 |
epithelial cord | 9.30e-07 | 1 |
sex cord | 9.30e-07 | 1 |
seminiferous tubule epithelium | 9.30e-07 | 1 |
testis sex cord | 9.30e-07 | 1 |
genital ridge | 9.30e-07 | 1 |
primitive sex cord of indifferent gonad | 9.30e-07 | 1 |
coelomic epithelium | 9.30e-07 | 1 |