FFCP PHASE1:Hg19::chr16:15833436..15833448,-: Difference between revisions
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|id=chr16:15833436..15833448,-
|short_description=p@chr16:15833436..15833448,-
|description=CAGE_peak_at_chr16:15833436..15833448,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:15833436..15833448,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr16:15833436..15833448,- | |||
|id=chr16:15833436..15833448,- | |||
|ontology_enrichment_celltype=CL:0000840!2.29e-10!5;CL:0001029!2.29e-10!5;CL:0000990!3.34e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.21e-43!3;UBERON:0005290!2.21e-43!3;UBERON:0010096!2.21e-43!3;UBERON:0002298!9.70e-17!8;UBERON:0001154!9.99e-16!1;UBERON:0001153!9.99e-16!1;UBERON:0002336!3.17e-15!1;UBERON:0001018!3.17e-15!1;UBERON:0002473!3.17e-15!1;UBERON:0005340!3.17e-15!1;UBERON:0002316!3.17e-15!1;UBERON:0003544!3.17e-15!1;UBERON:0001020!3.17e-15!1;UBERON:0005970!3.17e-15!1;UBERON:0002437!3.17e-15!1;UBERON:0002370!5.24e-15!4;UBERON:0005058!5.24e-15!4;UBERON:0009113!5.24e-15!4;UBERON:0003295!5.24e-15!4;UBERON:0005562!5.24e-15!4;UBERON:0004733!2.28e-11!12;UBERON:0002028!2.28e-11!12;UBERON:0007277!2.28e-11!12;UBERON:0007023!2.42e-11!115;UBERON:0004732!1.54e-10!13;UBERON:0003351!2.52e-10!6;UBERON:0003076!3.30e-09!15;UBERON:0003057!3.30e-09!15;UBERON:0004177!5.59e-09!7;UBERON:0000007!1.39e-08!2;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0005162!2.87e-08!2;UBERON:0000122!2.87e-08!2;UBERON:0002616!2.92e-08!59;UBERON:0000153!6.86e-08!129;UBERON:0007811!6.86e-08!129;UBERON:0003075!1.58e-07!86;UBERON:0007284!1.58e-07!86;UBERON:0005743!1.95e-07!86;UBERON:0002346!3.59e-07!90;UBERON:0000955!6.26e-07!69;UBERON:0006238!6.26e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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|short_description=p@chr16:15833436..15833448,- | |||
}} | }} |
Latest revision as of 06:36, 25 July 2015
Short description: | p@chr16:15833436..15833448, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15833436..15833448, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |