FFCP PHASE1:Hg19::chrX:113841312..113841332,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:113841312..113841332,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chrX:113841312..113841332,- | |description=CAGE_peak_at_chrX:113841312..113841332,- | ||
|id=chrX:113841312..113841332,- | |id=chrX:113841312..113841332,- | ||
|ontology_enrichment_celltype=CL:0002322!6.80e-82!5;CL:0000540!2.33e-25!6;CL:0000031!2.33e-25!6;CL:0000404!2.33e-25!6;CL:0000047!3.29e-19!8;CL:0000148!1.74e-15!10;CL:0000541!1.74e-15!10;CL:0000147!3.02e-11!14;CL:0000039!1.85e-10!7;CL:0000586!1.85e-10!7;CL:0000133!1.46e-09!59;CL:0000710!4.80e-08!20;CL:0000221!5.95e-08!71 | |ontology_enrichment_celltype=CL:0002322!6.80e-82!5;CL:0000540!2.33e-25!6;CL:0000031!2.33e-25!6;CL:0000404!2.33e-25!6;CL:0000047!3.29e-19!8;CL:0000148!1.74e-15!10;CL:0000541!1.74e-15!10;CL:0000147!3.02e-11!14;CL:0000039!1.85e-10!7;CL:0000586!1.85e-10!7;CL:0000133!1.46e-09!59;CL:0000710!4.80e-08!20;CL:0000221!5.95e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.84e-89;5!CL:0002321;6.18e-30;15!CL:0000148;8.57e-17;10!CL:0000540;4.00e-13;6!CL:0000404;4.00e-13;6!CL:0000147;3.44e-12;14!CL:0000039;2.42e-11;7!CL:0000586;2.42e-11;7!CL:0000710;1.03e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.85e-89,5;CL:0000148,8.57e-17,10;CL:0000541,8.57e-17,10;CL:0000540,4.26e-13,6;CL:0000031,4.26e-13,6;CL:0000404,4.26e-13,6;CL:0000147,3.45e-12,14;CL:0000039,2.69e-11,7;CL:0000586,2.69e-11,7;CL:0000047,4.62e-10,8;CL:0000710,1.03e-08,20;CL:0000133,1.81e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;4.00e-13;6!UBERON:0009117;3.25e-08;10!UBERON:0005564;3.25e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!1.94e-07!22;DOID:2994!1.94e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.66e-08;22!DOID:2994;4.66e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.66e-08,22;DOID:2994,4.66e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.89e-09!8;UBERON:0003135!5.64e-07!11 | |ontology_enrichment_uberon=UBERON:0000473!2.89e-09!8;UBERON:0003135!5.64e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.29e-10;49!UBERON:0000473;4.84e-10;8!UBERON:0003135;1.51e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.29e-10,8;UBERON:0003135,1.62e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,1.59035721985782,1.74290914304278,1.96956004529204,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,2.61324929534744,2.07720169014593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95017044301978,0,1.22386595690378,5.34434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,1.59035721985782,1.74290914304278,1.96956004529204,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,2.61324929534744,2.07720169014593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95017044301978,0,1.22386595690378,5.34434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:113841312..113841332,- | |short_description=p@chrX:113841312..113841332,- | ||
}} | }} |
Latest revision as of 05:09, 1 August 2015
Short description: | p@chrX:113841312..113841332, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:113841312..113841332, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.85e-89 | 5 |
melanocyte | 8.57e-17 | 10 |
melanoblast | 8.57e-17 | 10 |
neuron | 4.26e-13 | 6 |
neuroblast | 4.26e-13 | 6 |
electrically signaling cell | 4.26e-13 | 6 |
pigment cell | 3.45e-12 | 14 |
germ line cell | 2.69e-11 | 7 |
germ cell | 2.69e-11 | 7 |
neuronal stem cell | 4.62e-10 | 8 |
neurecto-epithelial cell | 1.03e-08 | 20 |
neurectodermal cell | 1.81e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 5.29e-10 | 8 |
male reproductive organ | 1.62e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.66e-08 | 22 |
germ cell cancer | 4.66e-08 | 22 |