FFCP PHASE1:Hg19::chrX:19819132..19819162,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:19819132..19819162,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chrX:19819132..19819162,- | |description=CAGE_peak_at_chrX:19819132..19819162,- | ||
|id=chrX:19819132..19819162,- | |id=chrX:19819132..19819162,- | ||
|ontology_enrichment_celltype=CL:0000542!2.14e-15!53;CL:0000051!2.14e-15!53;CL:0000838!5.42e-13!52;CL:0000945!5.77e-11!24;CL:0000826!5.77e-11!24;CL:0002127!3.87e-09!1;CL:0000914!3.87e-09!1;CL:0000911!3.87e-09!1;CL:0000814!3.87e-09!1;CL:0002042!3.87e-09!1;CL:0002039!3.87e-09!1;CL:0002040!3.87e-09!1;CL:0002041!3.87e-09!1;CL:0000738!7.46e-08!140;CL:0000037!5.89e-07!172;CL:0000566!5.89e-07!172;CL:0002087!6.44e-07!119 | |ontology_enrichment_celltype=CL:0000542!2.14e-15!53;CL:0000051!2.14e-15!53;CL:0000838!5.42e-13!52;CL:0000945!5.77e-11!24;CL:0000826!5.77e-11!24;CL:0002127!3.87e-09!1;CL:0000914!3.87e-09!1;CL:0000911!3.87e-09!1;CL:0000814!3.87e-09!1;CL:0002042!3.87e-09!1;CL:0002039!3.87e-09!1;CL:0002040!3.87e-09!1;CL:0002041!3.87e-09!1;CL:0000738!7.46e-08!140;CL:0000037!5.89e-07!172;CL:0000566!5.89e-07!172;CL:0002087!6.44e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002127;4.61e-26;1!CL:0000911;4.61e-26;1!CL:0000814;4.61e-26;1!CL:0000945;6.29e-17;24!CL:0000542;4.96e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.61e-26,1;CL:0000914,4.61e-26,1;CL:0000911,4.61e-26,1;CL:0000814,4.61e-26,1;CL:0002042,4.61e-26,1;CL:0002039,4.61e-26,1;CL:0002040,4.61e-26,1;CL:0002041,4.61e-26,1;CL:0000838,3.26e-17,52;CL:0000945,5.92e-17,24;CL:0000826,5.92e-17,24;CL:0000542,6.82e-17,53;CL:0000051,6.82e-17,53;CL:0000893,9.40e-14,2;CL:0002489,9.40e-14,2;CL:0000809,9.40e-14,2;CL:0000808,9.40e-14,2;CL:0000894,9.40e-14,2;CL:0000806,9.40e-14,2;CL:0000807,9.40e-14,2;CL:0000805,9.40e-14,2;CL:0002425,9.40e-14,2;CL:0002087,9.22e-08,115;CL:0002031,1.93e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002425;9.40e-14;2!CL:0000051;4.96e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!1.38e-10!51;DOID:0060083!1.38e-10!51;DOID:2355!4.89e-09!1;DOID:630!6.65e-09!1;DOID:0050177!6.65e-09!1;DOID:0050427!6.65e-09!1;DOID:12603!1.22e-08!1;DOID:4960!1.32e-08!1;DOID:0070004!1.32e-08!1;DOID:0060058!1.90e-07!10;DOID:0050686!8.48e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.11e-25;1!DOID:74;1.46e-13;2!DOID:0060058;6.44e-11;10!DOID:1287;1.98e-07;4!DOID:2531;4.38e-07;51!DOID:0060083;4.38e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.79e-26,1;DOID:74,1.37e-13,2;DOID:0060058,6.28e-11,10;DOID:2531,3.40e-08,51;DOID:0060083,3.40e-08,51;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.23e-17!7;UBERON:0002106!6.29e-11!3;UBERON:0004854!6.29e-11!3;UBERON:0009034!6.29e-11!3;UBERON:0002095!6.29e-11!3;UBERON:0004782!6.29e-11!3;UBERON:0003281!6.29e-11!3;UBERON:0009664!6.29e-11!3;UBERON:0002296!6.29e-11!3;UBERON:0005602!6.29e-11!3;UBERON:0001179!6.29e-11!3;UBERON:0006293!6.29e-11!3;UBERON:0002370!2.40e-08!4;UBERON:0005058!2.40e-08!4;UBERON:0009113!2.40e-08!4;UBERON:0003295!2.40e-08!4;UBERON:0005562!2.40e-08!4 | |ontology_enrichment_uberon=UBERON:0004177!3.23e-17!7;UBERON:0002106!6.29e-11!3;UBERON:0004854!6.29e-11!3;UBERON:0009034!6.29e-11!3;UBERON:0002095!6.29e-11!3;UBERON:0004782!6.29e-11!3;UBERON:0003281!6.29e-11!3;UBERON:0009664!6.29e-11!3;UBERON:0002296!6.29e-11!3;UBERON:0005602!6.29e-11!3;UBERON:0001179!6.29e-11!3;UBERON:0006293!6.29e-11!3;UBERON:0002370!2.40e-08!4;UBERON:0005058!2.40e-08!4;UBERON:0009113!2.40e-08!4;UBERON:0003295!2.40e-08!4;UBERON:0005562!2.40e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.85e-15,7;UBERON:0005057,2.85e-15,7;UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3;UBERON:0002370,1.59e-07,4;UBERON:0005058,1.59e-07,4;UBERON:0009113,1.59e-07,4;UBERON:0003295,1.59e-07,4;UBERON:0005562,1.59e-07,4 | |||
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|short_description=p@chrX:19819132..19819162,- | |short_description=p@chrX:19819132..19819162,- | ||
}} | }} |
Latest revision as of 07:25, 1 August 2015
Short description: | p@chrX:19819132..19819162, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:19819132..19819162, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.61e-26 | 1 |
immature NK T cell | 4.61e-26 | 1 |
effector T cell | 4.61e-26 | 1 |
mature NK T cell | 4.61e-26 | 1 |
immature NK T cell stage IV | 4.61e-26 | 1 |
immature NK T cell stage I | 4.61e-26 | 1 |
immature NK T cell stage II | 4.61e-26 | 1 |
immature NK T cell stage III | 4.61e-26 | 1 |
lymphoid lineage restricted progenitor cell | 3.26e-17 | 52 |
lymphocyte of B lineage | 5.92e-17 | 24 |
pro-B cell | 5.92e-17 | 24 |
lymphocyte | 6.82e-17 | 53 |
common lymphoid progenitor | 6.82e-17 | 53 |
thymocyte | 9.40e-14 | 2 |
double negative thymocyte | 9.40e-14 | 2 |
double-positive, alpha-beta thymocyte | 9.40e-14 | 2 |
DN4 thymocyte | 9.40e-14 | 2 |
DN1 thymic pro-T cell | 9.40e-14 | 2 |
DN2 thymocyte | 9.40e-14 | 2 |
DN3 thymocyte | 9.40e-14 | 2 |
immature single positive thymocyte | 9.40e-14 | 2 |
early T lineage precursor | 9.40e-14 | 2 |
nongranular leukocyte | 9.22e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.93e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.85e-15 | 7 |
immune organ | 2.85e-15 | 7 |
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |
thymus | 1.59e-07 | 4 |
hemolymphoid system gland | 1.59e-07 | 4 |
thymic region | 1.59e-07 | 4 |
pharyngeal gland | 1.59e-07 | 4 |
thymus primordium | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.79e-26 | 1 |
hematopoietic system disease | 1.37e-13 | 2 |
lymphoma | 6.28e-11 | 10 |
hematologic cancer | 3.40e-08 | 51 |
immune system cancer | 3.40e-08 | 51 |
cardiovascular system disease | 1.92e-07 | 4 |