FFCP PHASE1:Hg19::chr16:28913935..28913946,+: Difference between revisions
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|id=chr16:28913935..28913946,+
|short_description=p@chr16:28913935..28913946,+
|description=CAGE_peak_at_chr16:28913935..28913946,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:28913935..28913946,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_at_chr16:28913935..28913946,+ | |||
|id=chr16:28913935..28913946,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.78e-29;1!UBERON:0008814;1.33e-15;2!UBERON:0010056;1.33e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!5.32e-17!2;UBERON:0001829!1.48e-16!2;UBERON:0001723!7.91e-12!3;UBERON:0001033!7.91e-12!3;UBERON:0010056!7.91e-12!3;UBERON:0000078!9.74e-11!18;UBERON:0000989!1.89e-09!1;UBERON:0008811!1.89e-09!1;UBERON:0006258!1.89e-09!1;UBERON:0005876!1.89e-09!1;UBERON:0004874!1.89e-09!1;UBERON:0002426!2.82e-09!1;UBERON:0003831!2.82e-09!1;UBERON:0003898!2.82e-09!1;UBERON:0004830!2.82e-09!1;UBERON:0001774!2.82e-09!1;UBERON:0003830!2.82e-09!1;UBERON:0005175!2.82e-09!1;UBERON:0003897!2.82e-09!1;UBERON:0001103!2.82e-09!1;UBERON:0010084!2.82e-09!1;UBERON:0000166!3.55e-09!21;UBERON:0001831!3.58e-09!1;UBERON:0001567!3.58e-09!1;UBERON:0008801!3.58e-09!1;UBERON:0007029!3.88e-09!1;UBERON:0001736!4.19e-09!1;UBERON:0006298!4.19e-09!1;UBERON:0002372!1.07e-08!1;UBERON:0001961!1.07e-08!1;UBERON:0001744!1.07e-08!1;UBERON:0001735!1.07e-08!1;UBERON:0008814!1.61e-08!15;UBERON:0001042!1.25e-07!10;UBERON:0009145!1.25e-07!10;UBERON:0007023!1.50e-07!115;UBERON:0006562!5.65e-07!11;UBERON:0002046!6.56e-07!5;UBERON:0004117!6.56e-07!5;UBERON:0007689!6.56e-07!5;UBERON:0007123!6.56e-07!5;UBERON:0003091!6.56e-07!5;UBERON:0000165!7.93e-07!28;UBERON:0000930!7.93e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;9.77e-57;2!UBERON:0001723;6.91e-39;3!UBERON:0001033;6.91e-39;3!UBERON:0000989;1.78e-29;1!UBERON:0008811;1.78e-29;1!UBERON:0000974;9.95e-20;6!UBERON:0001134;5.00e-08;16!UBERON:0002036;5.00e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.13e-56,2;UBERON:0001723,6.91e-39,3;UBERON:0001033,6.91e-39,3;UBERON:0010056,6.91e-39,3;UBERON:0000989,1.33e-29,1;UBERON:0008811,1.33e-29,1;UBERON:0006258,1.33e-29,1;UBERON:0005876,1.33e-29,1;UBERON:0004874,1.33e-29,1;UBERON:0001042,1.89e-12,10;UBERON:0009145,1.89e-12,10;UBERON:0000974,2.98e-12,10;UBERON:0006562,2.07e-11,11;UBERON:0000153,8.30e-08,62;UBERON:0007811,8.30e-08,62;UBERON:0008814,2.44e-07,18;UBERON:0001557,5.34e-07,19 | |||
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|short_description=p@chr16:28913935..28913946,+ | |||
}} | }} |
Latest revision as of 07:46, 25 July 2015
Short description: | p@chr16:28913935..28913946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:28913935..28913946, + |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.13e-56 | 2 |
tongue | 6.91e-39 | 3 |
gustatory system | 6.91e-39 | 3 |
future tongue | 6.91e-39 | 3 |
penis | 1.33e-29 | 1 |
intromittent organ | 1.33e-29 | 1 |
lateral plate mesenchyme | 1.33e-29 | 1 |
undifferentiated genital tubercle | 1.33e-29 | 1 |
somatopleure | 1.33e-29 | 1 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
neck | 2.98e-12 | 10 |
pharynx | 2.07e-11 | 11 |
anterior region of body | 8.30e-08 | 62 |
craniocervical region | 8.30e-08 | 62 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |