FFCP PHASE1:Hg19::chr5:52781899..52781903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:52781899..52781903,- | |||
|description=CAGE_peak_at_chr5:52781899..52781903,- | |description=CAGE_peak_at_chr5:52781899..52781903,- | ||
|id=chr5:52781899..52781903,- | |id=chr5:52781899..52781903,- | ||
|ontology_enrichment_celltype=CL:0000057!5.74e-18!75;CL:0000055!4.78e-13!180;CL:0000548!2.08e-08!679;CL:0000004!2.08e-08!679;CL:0000255!2.08e-08!679;CL:0002620!3.30e-08!23;CL:0000012!3.57e-08!682;CL:0002371!4.07e-08!591;CL:0000144!1.57e-07!625;CL:0000003!8.16e-07!722 | |ontology_enrichment_celltype=CL:0000057!5.74e-18!75;CL:0000055!4.78e-13!180;CL:0000548!2.08e-08!679;CL:0000004!2.08e-08!679;CL:0000255!2.08e-08!679;CL:0002620!3.30e-08!23;CL:0000012!3.57e-08!682;CL:0002371!4.07e-08!591;CL:0000144!1.57e-07!625;CL:0000003!8.16e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002593;1.18e-11;2!CL:0002159;3.38e-09;14!CL:0002166;4.53e-08;3!CL:0002615;5.68e-08;3!CL:0000214;5.68e-08;3!CL:0002328;1.04e-07;3!CL:0002553;8.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.06e-11,2;CL:0002159,3.61e-09,14;CL:0002166,4.38e-08,3;CL:0002615,7.91e-08,3;CL:0002328,8.19e-08,3;CL:0000214,8.48e-08,3;CL:0002553,7.35e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.10e-13!95;UBERON:0002097!1.08e-08!40;UBERON:0002199!4.91e-07!45;UBERON:0002416!4.91e-07!45 | |ontology_enrichment_uberon=UBERON:0003102!5.10e-13!95;UBERON:0002097!1.08e-08!40;UBERON:0002199!4.91e-07!45;UBERON:0002416!4.91e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.18e-11;2!UBERON:0004457;1.50e-09;9!UBERON:0000042;1.50e-09;9!UBERON:0006915;5.68e-08;3!UBERON:0007616;5.68e-08;3!UBERON:0002217;5.68e-08;3!UBERON:0002018;5.68e-08;3!UBERON:0011137;6.18e-08;11!UBERON:0010323;6.18e-08;11!UBERON:0004815;1.04e-07;3!UBERON:0002031;1.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.06e-11,2;UBERON:0003102,1.24e-08,99;UBERON:0010188,2.12e-08,6;UBERON:0002539,2.12e-08,6;UBERON:0008816,2.12e-08,6;UBERON:0010323,5.66e-08,11;UBERON:0004815,8.19e-08,3;UBERON:0002031,8.19e-08,3;UBERON:0006915,8.48e-08,3;UBERON:0007616,8.48e-08,3;UBERON:0002217,8.48e-08,3;UBERON:0002018,8.48e-08,3;UBERON:0004457,5.00e-07,12;UBERON:0000042,5.00e-07,12 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,2.68176656656373,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,0.926864265692532,1.14734648299525,0,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,1.40921398372518,0.809364721840658,0.280901613404497,0.204154171254893,0.737005903870608,0.103325781175765,2.37600571456411,3.4617370098998,0,0,0.505008341862199,0,0,0.438977620880838,13.1789752193578,1.35214253015937,0.794025282120147,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.644349290496095,0,1.06502877754984,0.10075209822764,0.339121184620975,0.966304265816484,0,0,0,0,0,0,0,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.09750285408626,2.24803506515239,0.603173834469785,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,4.68669169933885,0,1.27597587518148,1.25381931783988,0.871901815541886,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.473107245101804,0.35142424497814,0,0,0,0,0,1.47702144595741,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,0,0,1.48418066444991,0,0,0,0,0.348631135379878,0,0.200506470303285,0,0.34444334449382,2.00300284807389,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,1.6068392984416,0.290012154876366,0,0.614014698904518,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.404364963146632,0,0.842516912477962,0,3.41198885483798,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,2.30506425071931,0,0,0.769776901804097,0,2.17781969722645,0,0.43050537267123,0,0,1.1486170010348,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,1.59518878185802,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.482259445395058,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0.896436696664224,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0.151649117541648,0,1.88212655758537,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,0,0.457680136793847,0.453692771289717,0.310874401165561,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0.839277046316667,0,0,0,0.314531883711793,0,0,0,0.247871528518004,0,0.318004350653419,0,2.40171224485641,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,1.28400018965175,0.462102664601353,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0,0,0,0,0,1.22354542081276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0,0,0.9164274741762,0,0,0,0,0,0,0.205325613712494,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,2.35158648180761,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,1.38652688589425,0.432626562123789,0.378499274505237,0.109265571963696,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,2.68176656656373,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,1.49091585508596,0.379891534993739,0.926864265692532,1.14734648299525,0,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,1.40921398372518,0.809364721840658,0.280901613404497,0.204154171254893,0.737005903870608,0.103325781175765,2.37600571456411,3.4617370098998,0,0,0.505008341862199,0,0,0.438977620880838,13.1789752193578,1.35214253015937,0.794025282120147,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.644349290496095,0,1.06502877754984,0.10075209822764,0.339121184620975,0.966304265816484,0,0,0,0,0,0,0,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.09750285408626,2.24803506515239,0.603173834469785,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,4.68669169933885,0,1.27597587518148,1.25381931783988,0.871901815541886,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0.473107245101804,0.35142424497814,0,0,0,0,0,1.47702144595741,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,0,0,1.48418066444991,0,0,0,0,0.348631135379878,0,0.200506470303285,0,0.34444334449382,2.00300284807389,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,1.6068392984416,0.290012154876366,0,0.614014698904518,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.404364963146632,0,0.842516912477962,0,3.41198885483798,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,2.30506425071931,0,0,0.769776901804097,0,2.17781969722645,0,0.43050537267123,0,0,1.1486170010348,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,1.59518878185802,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.482259445395058,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0.896436696664224,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0.151649117541648,0,1.88212655758537,0,0,0.149254802886874,0,0.554805861502613,0.378806010550178,0,0,0.457680136793847,0.453692771289717,0.310874401165561,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0.839277046316667,0,0,0,0.314531883711793,0,0,0,0.247871528518004,0,0.318004350653419,0,2.40171224485641,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,1.28400018965175,0.462102664601353,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0,0,0,0,0,1.22354542081276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0,0,0.9164274741762,0,0,0,0,0,0,0.205325613712494,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,2.35158648180761,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,1.38652688589425,0.432626562123789,0.378499274505237,0.109265571963696,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:52781899..52781903,- | |short_description=p@chr5:52781899..52781903,- | ||
}} | }} |
Latest revision as of 15:11, 30 July 2015
Short description: | p@chr5:52781899..52781903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52781899..52781903, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.06e-11 | 2 |
general ecto-epithelial cell | 3.61e-09 | 14 |
epithelial cell of Malassez | 4.38e-08 | 3 |
adipocyte of omentum tissue | 7.91e-08 | 3 |
bronchial epithelial cell | 8.19e-08 | 3 |
synovial cell | 8.48e-08 | 3 |
lung fibroblast | 7.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.06e-11 | 2 |
surface structure | 1.24e-08 | 99 |
protuberance | 2.12e-08 | 6 |
pharyngeal arch | 2.12e-08 | 6 |
embryonic head | 2.12e-08 | 6 |
cranial skeletal system | 5.66e-08 | 11 |
lower respiratory tract epithelium | 8.19e-08 | 3 |
epithelium of bronchus | 8.19e-08 | 3 |
stratified squamous epithelium | 8.48e-08 | 3 |
layer of synovial tissue | 8.48e-08 | 3 |
synovial joint | 8.48e-08 | 3 |
synovial membrane of synovial joint | 8.48e-08 | 3 |
cavity lining | 5.00e-07 | 12 |
serous membrane | 5.00e-07 | 12 |