FFCP PHASE1:Hg19::chr6:125540951..125540969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7164 | |EntrezGene=7164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12006 | |HGNC=12006 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000524679_5end | |association_with_transcript=-21bp_to_ENST00000524679_5end | ||
|cluster_id=chr6:125540951..125540969,+ | |||
|coexpression_cluster_id=C4554 | |||
|description=CAGE_peak_8_at_TPD52L1_5end | |description=CAGE_peak_8_at_TPD52L1_5end | ||
|id=chr6:125540951..125540969,+ | |id=chr6:125540951..125540969,+ | ||
|ontology_enrichment_celltype=CL:0000064!9.96e-17!3;CL:0005012!9.96e-17!3;CL:0000067!9.96e-17!3;CL:0002304!9.96e-17!3;CL:0000342!8.49e-07!1;CL:0002565!8.49e-07!1;CL:0000313!8.97e-07!1 | |ontology_enrichment_celltype=CL:0000064!9.96e-17!3;CL:0005012!9.96e-17!3;CL:0000067!9.96e-17!3;CL:0002304!9.96e-17!3;CL:0000342!8.49e-07!1;CL:0002565!8.49e-07!1;CL:0000313!8.97e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000342;2.75e-15;1!CL:0002565;2.75e-15;1!CL:0002563;3.18e-15;4!CL:0002253;1.86e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.42e-15,4;CL:0000342,3.66e-15,1;CL:0002565,3.66e-15,1;CL:0002253,2.15e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!8.97e-07!1 | |ontology_enrichment_disease=DOID:2152!8.97e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3119;6.63e-10;14!DOID:4468;2.67e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.04e-10,14;DOID:4468,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!8.25e-22!4;UBERON:0007625!4.08e-17!11;UBERON:0001778!9.96e-17!3;UBERON:0001775!9.96e-17!3;UBERON:0002203!1.34e-14!6;UBERON:0001768!1.34e-14!6;UBERON:0000019!5.15e-13!19;UBERON:0000047!5.15e-13!19;UBERON:0004088!5.15e-13!19;UBERON:0003072!5.15e-13!19;UBERON:0003071!5.15e-13!19;UBERON:0004128!5.15e-13!19;UBERON:0000970!2.56e-12!20;UBERON:0002104!1.09e-11!21;UBERON:0001456!1.09e-11!21;UBERON:0000020!1.36e-10!23;UBERON:0001032!4.11e-10!24;UBERON:0004456!4.11e-10!24;UBERON:0003056!6.00e-10!61;UBERON:0001801!2.01e-09!14;UBERON:0003075!6.21e-09!86;UBERON:0007284!6.21e-09!86;UBERON:0002346!2.04e-08!90;UBERON:0005085!3.27e-08!29;UBERON:0002200!5.24e-08!11;UBERON:0006876!5.24e-08!11;UBERON:0002506!8.49e-07!1;UBERON:0001769!8.49e-07!1;UBERON:0004911!8.97e-07!1 | |ontology_enrichment_uberon=UBERON:0000488!8.25e-22!4;UBERON:0007625!4.08e-17!11;UBERON:0001778!9.96e-17!3;UBERON:0001775!9.96e-17!3;UBERON:0002203!1.34e-14!6;UBERON:0001768!1.34e-14!6;UBERON:0000019!5.15e-13!19;UBERON:0000047!5.15e-13!19;UBERON:0004088!5.15e-13!19;UBERON:0003072!5.15e-13!19;UBERON:0003071!5.15e-13!19;UBERON:0004128!5.15e-13!19;UBERON:0000970!2.56e-12!20;UBERON:0002104!1.09e-11!21;UBERON:0001456!1.09e-11!21;UBERON:0000020!1.36e-10!23;UBERON:0001032!4.11e-10!24;UBERON:0004456!4.11e-10!24;UBERON:0003056!6.00e-10!61;UBERON:0001801!2.01e-09!14;UBERON:0003075!6.21e-09!86;UBERON:0007284!6.21e-09!86;UBERON:0002346!2.04e-08!90;UBERON:0005085!3.27e-08!29;UBERON:0002200!5.24e-08!11;UBERON:0006876!5.24e-08!11;UBERON:0002506!8.49e-07!1;UBERON:0001769!8.49e-07!1;UBERON:0004911!8.97e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.07e-15;4!UBERON:0002506;2.75e-15;1!UBERON:0001769;2.75e-15;1!UBERON:0001242;3.18e-15;4!UBERON:0001262;3.18e-15;4!UBERON:0004786;3.18e-15;4!UBERON:0004808;3.18e-15;4!UBERON:0001277;3.18e-15;4!UBERON:0000488;4.55e-15;4!UBERON:0004907;1.59e-12;5!UBERON:0002203;2.29e-10;6!UBERON:0001768;2.29e-10;6!UBERON:0002200;2.29e-10;6!UBERON:0005409;2.60e-10;22!UBERON:0000485;4.21e-09;7!UBERON:0003929;4.21e-09;7!UBERON:0000007;1.86e-08;2!UBERON:0003350;4.50e-08;8!UBERON:0000160;8.81e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.39e-15,4;UBERON:0001242,3.42e-15,4;UBERON:0001262,3.42e-15,4;UBERON:0004786,3.42e-15,4;UBERON:0004808,3.42e-15,4;UBERON:0001277,3.42e-15,4;UBERON:0002506,3.66e-15,1;UBERON:0001769,3.66e-15,1;UBERON:0000488,5.24e-15,4;UBERON:0004907,1.79e-12,5;UBERON:0002203,2.52e-10,6;UBERON:0001768,2.52e-10,6;UBERON:0002200,2.52e-10,6;UBERON:0005409,3.85e-09,25;UBERON:0000007,2.00e-08,2;UBERON:0003350,4.66e-08,8;UBERON:0000160,9.02e-08,17;UBERON:0001046,2.54e-07,19;UBERON:0000485,2.95e-07,9 | |||
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|short_description=p8@TPD52L1 | |short_description=p8@TPD52L1 | ||
}} | }} |
Latest revision as of 07:27, 20 September 2015
Short description: | p8@TPD52L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TPD52L1_5end |
Coexpression cluster: | C4554_rectal_small_gastric_hepatoblastoma_Intestinal_mesothelioma_colon |
Association with transcript: | -21bp_to_ENST00000524679_5end |
EntrezGene: | TPD52L1 |
HGNC: | 12006 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.42e-15 | 4 |
pigment cell (sensu Vertebrata) | 3.66e-15 | 1 |
iris pigment epithelial cell | 3.66e-15 | 1 |
epithelial cell of large intestine | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 2.39e-15 | 4 |
intestinal mucosa | 3.42e-15 | 4 |
wall of intestine | 3.42e-15 | 4 |
gastrointestinal system mucosa | 3.42e-15 | 4 |
gastrointestinal system epithelium | 3.42e-15 | 4 |
intestinal epithelium | 3.42e-15 | 4 |
iris epithelium | 3.66e-15 | 1 |
iris | 3.66e-15 | 1 |
atypical epithelium | 5.24e-15 | 4 |
lower digestive tract | 1.79e-12 | 5 |
vasculature of eye | 2.52e-10 | 6 |
uvea | 2.52e-10 | 6 |
vasculature of head | 2.52e-10 | 6 |
gastrointestinal system | 3.85e-09 | 25 |
pituitary gland | 2.00e-08 | 2 |
epithelium of mucosa | 4.66e-08 | 8 |
intestine | 9.02e-08 | 17 |
hindgut | 2.54e-07 | 19 |
simple columnar epithelium | 2.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.04e-10 | 14 |
clear cell adenocarcinoma | 2.67e-08 | 2 |