FFCP PHASE1:Hg19::chr6:3752382..3752394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221749 | |EntrezGene=221749 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21361 | |HGNC=21361 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TGL8 | |UniProt=Q5TGL8 | ||
|association_with_transcript=-122bp_to_ENST00000380283_5end | |association_with_transcript=-122bp_to_ENST00000380283_5end | ||
|cluster_id=chr6:3752382..3752394,- | |||
|description=CAGE_peak_7_at_PXDC1_5end | |description=CAGE_peak_7_at_PXDC1_5end | ||
|id=chr6:3752382..3752394,- | |id=chr6:3752382..3752394,- | ||
|ontology_enrichment_celltype=CL:0000213!8.04e-15!57;CL:0000215!8.04e-15!57;CL:0000222!9.28e-14!119;CL:0002078!2.66e-11!44;CL:0000115!2.98e-11!35;CL:0000066!1.11e-09!254;CL:0000220!1.84e-09!246;CL:0002321!2.79e-09!248;CL:0002139!2.30e-08!24;CL:0000055!9.14e-07!180 | |ontology_enrichment_celltype=CL:0000213!8.04e-15!57;CL:0000215!8.04e-15!57;CL:0000222!9.28e-14!119;CL:0002078!2.66e-11!44;CL:0000115!2.98e-11!35;CL:0000066!1.11e-09!254;CL:0000220!1.84e-09!246;CL:0002321!2.79e-09!248;CL:0002139!2.30e-08!24;CL:0000055!9.14e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000115;8.27e-13;36!CL:0002139;1.98e-09;24!CL:0002078;1.73e-08;45!CL:0000213;1.83e-08;58!CL:0000215;1.83e-08;58!CL:0000136;4.49e-08;13!CL:0000349;9.58e-08;19!CL:0002334;9.01e-07;12!CL:0002681;9.81e-07;12!CL:0002584;9.81e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.36e-16,58;CL:0000215,6.36e-16,58;CL:0000115,1.29e-14,36;CL:0002078,4.39e-13,45;CL:0002139,2.91e-09,24;CL:0000222,1.02e-07,121;CL:0000349,1.02e-07,19;CL:0000066,7.36e-07,253;CL:0000136,7.94e-07,15;CL:0002579,9.19e-07,3;CL:0002334,9.82e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.13e-10!118;UBERON:0000477!3.56e-10!286;UBERON:0000119!2.21e-09!312;UBERON:0000483!4.22e-09!309;UBERON:0004872!4.87e-09!84;UBERON:0009569!1.10e-08!113;UBERON:0004111!1.45e-08!241;UBERON:0002417!1.64e-08!61;UBERON:0000916!1.64e-08!61;UBERON:0002049!1.89e-08!79;UBERON:0007798!1.89e-08!79;UBERON:0000025!2.07e-08!194;UBERON:0000490!2.13e-08!138;UBERON:0000467!6.58e-08!625;UBERON:0000055!8.00e-08!69;UBERON:0000480!9.52e-08!626;UBERON:0005631!1.45e-07!14;UBERON:0000158!1.45e-07!14;UBERON:0000468!1.95e-07!659;UBERON:0001981!3.00e-07!60;UBERON:0007500!3.00e-07!60;UBERON:0004537!3.00e-07!60;UBERON:0006965!3.00e-07!60;UBERON:0000064!4.65e-07!219 | |ontology_enrichment_uberon=UBERON:0003914!1.13e-10!118;UBERON:0000477!3.56e-10!286;UBERON:0000119!2.21e-09!312;UBERON:0000483!4.22e-09!309;UBERON:0004872!4.87e-09!84;UBERON:0009569!1.10e-08!113;UBERON:0004111!1.45e-08!241;UBERON:0002417!1.64e-08!61;UBERON:0000916!1.64e-08!61;UBERON:0002049!1.89e-08!79;UBERON:0007798!1.89e-08!79;UBERON:0000025!2.07e-08!194;UBERON:0000490!2.13e-08!138;UBERON:0000467!6.58e-08!625;UBERON:0000055!8.00e-08!69;UBERON:0000480!9.52e-08!626;UBERON:0005631!1.45e-07!14;UBERON:0000158!1.45e-07!14;UBERON:0000468!1.95e-07!659;UBERON:0001981!3.00e-07!60;UBERON:0007500!3.00e-07!60;UBERON:0004537!3.00e-07!60;UBERON:0006965!3.00e-07!60;UBERON:0000064!4.65e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.66e-11;6!UBERON:0002358;1.66e-11;6!UBERON:0003684;1.66e-11;6!UBERON:0001178;1.66e-11;6!UBERON:0000353;9.89e-09;15!UBERON:0002417;1.09e-07;58!UBERON:0000916;1.09e-07;58!UBERON:0004457;2.50e-07;9!UBERON:0000042;2.50e-07;9!UBERON:0000478;4.56e-07;24!UBERON:0001225;9.81e-07;12!UBERON:0008987;9.81e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002417,8.26e-12,60;UBERON:0000916,8.26e-12,60;UBERON:0003688,1.39e-11,6;UBERON:0002358,1.39e-11,6;UBERON:0003684,1.39e-11,6;UBERON:0001178,1.39e-11,6;UBERON:0009569,2.97e-10,112;UBERON:0003124,1.51e-09,7;UBERON:0005631,4.10e-09,14;UBERON:0000158,4.10e-09,14;UBERON:0000353,1.57e-08,15;UBERON:0003914,2.68e-08,117;UBERON:0000478,4.70e-07,24;UBERON:0005172,8.34e-07,54;UBERON:0005173,8.34e-07,54 | |||
|phase1_expression=2.36181893051724,1.49870366723688,2.25527046553554,4.00293193412522,1.34088328328186,2.61701557230111,5.06599756336621,0.631719873426831,0.783556884599516,0.737201809504527,2.79120467188971,0.655324116390517,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.738726348460727,0.612002073732759,0.940364164434263,0.286235987131057,0.821246550437305,1.25542639594803,0,0,0,0,0,0.309632246632152,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,1.11957737119962,0,0.257575567634187,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0.797747763113191,0,0,0,1.78886166630035,0.860234595106124,0.694281003215189,0.56530794192401,2.09749718104953,1.6507082516404,1.25396979922086,1.03366703667732,2.13459757612026,1.33888245105868,2.01414658554573,0.760272105718513,2.4406205754817,0.367663080345869,1.62028389576352,0.714397826272638,0,0.337834441449967,3.06633274931766,0,1.09921046358244,0,0,0,1.49091585508596,1.13967460498122,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0.538842688278752,0.817309515567294,1.05950199351452,0.576175924479999,0.70296429550139,0,0,0,0.117434498643765,0.647491777472526,0,0,0.122834317311768,0.619954687054593,0,0.741800787835671,0,0,0.168336113954066,0,0,0.438977620880838,0,0.751190294532984,1.24775401476023,0.358779271377724,0.85422955527427,0.635795703478686,0.300091096084402,0.618315175430633,0.257640540045629,0.744467425326359,0,0.974370051611986,0,0.184099797284599,0.161646056818812,0,0.604512589365842,1.01736355386293,0.193260853163297,0,0,0,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,1.92972281457866,0,0,0,1.53798840051797,1.18009283054671,0.241011029883482,1.43382164552112,2.61455332910887,1.66089433377768,0.943819157121151,0.588664395376038,0,3.69077727312324,2.80483547606892,3.2925920906512,2.94017422771084,0,0.982827216677626,0,0,1.35287282397425,0.514703430895577,0.329250856225877,0,0.100528972411631,0,0.651616610620649,0,1.44331342025273,0.34779121492523,0.469634776943287,1.01056513432752,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0,0,0.671928512795438,0.141775097242386,0.268675568108545,0.581267877027924,1.15014803749563,0,0,0,0.144119953416961,0.37872730027914,0.253991577168676,0.381988425558278,0,0,0.616964956219941,0.300343057843917,0.571652865261156,0.448524337381443,0.43596006883328,0.2933531432838,0.129271715757778,0,0,1.32969058292435,2.08014873822732,0.257207374262142,0,0,0.57191197463259,0,0,0.325736184293735,1.06617584622764,0,0.602878754119172,1.74306691720059,1.19967589418468,0,0,0,2.63587341040741,2.29723871668228,0,0.434343920002738,0.410952645100767,0.716243852959582,0,0,0,0,0.254094624222463,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0.542530047399471,1.45579603071565,1.24900292158013,2.83864347061082,1.87426263988341,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.60818530127658,0.391602314925481,1.02943027143257,0,0,0.106727557803444,0.909382714338778,3.32870879020994,1.20956117331872,1.24053903909388,1.2276957863045,0.561320188866147,2.81906128362542,2.55853624533352,2.57366273829772,2.96836132889982,0,0.177561725313127,0.246381468041427,2.07701771673448,0.464841513839837,0.725156697549733,0.40101294060657,0.460404944679482,0,0,0.655622074797121,2.25599806453706,1.00119938235739,0,0,0.316654886678627,5.68666920354483,0.850468526382578,0.215915916102139,3.08454505380579,0.812839312631559,1.50506932156456,1.01950509218015,0,0.447749509444357,0,0,0.512900250232778,1.31205858279882,3.25378394664303,1.95777922130672,0.366277859273374,0.41254749960294,0.574265537996172,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.137836572484531,0.322260734604821,0,0.170453254832202,0.534192213880424,0.661139661443912,0,0.255225424989168,0.4046311234222,1.39453664789186,0.94443704049192,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0.572499546967965,0.744316738719335,0,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0.359744915166629,1.09814811894422,0.706874414074119,0.404364963146632,0,0.421258456238981,0.975267478179181,0.731140468893853,1.05650146756755,0.545999645631943,0.424216295861138,0,0,0.66343897524122,1.31535265576129,0,0,0,0,0.845086807596724,0,0.392996164052485,0.35667105148125,0,0.211107635297664,0.329294892959902,1.13841952129715,0.349934720244983,0.0962221127255121,0,0,1.12972560932135,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p7@PXDC1 | |short_description=p7@PXDC1 | ||
}} | }} |
Latest revision as of 15:19, 18 September 2015
Short description: | p7@PXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_ENST00000380283_5end |
EntrezGene: | PXDC1 |
HGNC: | 21361 |
UniProt: | Q5TGL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.36e-16 | 58 |
barrier cell | 6.36e-16 | 58 |
endothelial cell | 1.29e-14 | 36 |
meso-epithelial cell | 4.39e-13 | 45 |
endothelial cell of vascular tree | 2.91e-09 | 24 |
mesodermal cell | 1.02e-07 | 121 |
extraembryonic cell | 1.02e-07 | 19 |
epithelial cell | 7.36e-07 | 253 |
fat cell | 7.94e-07 | 15 |
omentum preadipocyte | 9.19e-07 | 3 |
preadipocyte | 9.82e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
abdominal segment of trunk | 8.26e-12 | 60 |
abdomen | 8.26e-12 | 60 |
omentum | 1.39e-11 | 6 |
peritoneum | 1.39e-11 | 6 |
abdominal cavity | 1.39e-11 | 6 |
visceral peritoneum | 1.39e-11 | 6 |
subdivision of trunk | 2.97e-10 | 112 |
chorion | 1.51e-09 | 7 |
extraembryonic membrane | 4.10e-09 | 14 |
membranous layer | 4.10e-09 | 14 |
parenchyma | 1.57e-08 | 15 |
epithelial tube | 2.68e-08 | 117 |
extraembryonic structure | 4.70e-07 | 24 |
abdomen element | 8.34e-07 | 54 |
abdominal segment element | 8.34e-07 | 54 |