FFCP PHASE1:Hg19::chr6:44621525..44621566,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:44621525..44621566,- | |||
|description=CAGE_peak_at_chr6:44621525..44621566,- | |description=CAGE_peak_at_chr6:44621525..44621566,- | ||
|id=chr6:44621525..44621566,- | |id=chr6:44621525..44621566,- | ||
|ontology_enrichment_celltype=CL:0000055!1.72e-13!180;CL:0002603!1.75e-09!3;CL:0002620!2.12e-09!23;CL:0002615!2.30e-09!3;CL:0000188!6.17e-09!9;CL:0002579!7.25e-08!3;CL:0000594!1.60e-07!3;CL:0000680!4.98e-07!57;CL:0000056!4.98e-07!57;CL:0000355!4.98e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.72e-13!180;CL:0002603!1.75e-09!3;CL:0002620!2.12e-09!23;CL:0002615!2.30e-09!3;CL:0000188!6.17e-09!9;CL:0002579!7.25e-08!3;CL:0000594!1.60e-07!3;CL:0000680!4.98e-07!57;CL:0000056!4.98e-07!57;CL:0000355!4.98e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002603;1.63e-36;3!CL:0002615;8.20e-36;3!CL:0000128;4.76e-16;7!CL:0000126;4.76e-16;7!CL:0000127;4.76e-16;7!CL:0000136;9.61e-09;13!CL:0000243;6.42e-07;15!CL:0000125;6.42e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,1.64e-36,3;CL:0002615,5.42e-36,3;CL:0000128,4.77e-16,7;CL:0000126,4.77e-16,7;CL:0000127,4.77e-16,7;CL:0002453,4.77e-16,7;CL:0000136,1.12e-07,15;CL:0000243,6.42e-07,15;CL:0000125,6.42e-07,15;CL:0000030,6.42e-07,15;CL:0000339,6.42e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;6.42e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.66e-15!6;UBERON:0002358!1.66e-15!6;UBERON:0003684!1.66e-15!6;UBERON:0001178!1.66e-15!6;UBERON:0004457!2.44e-07!12;UBERON:0000042!2.44e-07!12 | |ontology_enrichment_uberon=UBERON:0003688!1.66e-15!6;UBERON:0002358!1.66e-15!6;UBERON:0003684!1.66e-15!6;UBERON:0001178!1.66e-15!6;UBERON:0004457!2.44e-07!12;UBERON:0000042!2.44e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.29e-18;6!UBERON:0003688;2.86e-18;6!UBERON:0002358;2.86e-18;6!UBERON:0003684;2.86e-18;6!UBERON:0001178;2.86e-18;6!UBERON:0002680;1.29e-12;9!UBERON:0001895;1.29e-12;9!UBERON:0004457;2.19e-12;9!UBERON:0000042;2.19e-12;9!UBERON:0004733;1.34e-09;12!UBERON:0002028;1.34e-09;12!UBERON:0004732;6.71e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.29e-18,6;UBERON:0006215,1.29e-18,6;UBERON:0003688,2.33e-18,6;UBERON:0002358,2.33e-18,6;UBERON:0003684,2.33e-18,6;UBERON:0001178,2.33e-18,6;UBERON:0002680,1.29e-12,9;UBERON:0001895,1.29e-12,9;UBERON:0010092,1.29e-12,9;UBERON:0004733,1.34e-09,12;UBERON:0002028,1.34e-09,12;UBERON:0007277,1.34e-09,12;UBERON:0004457,1.79e-09,12;UBERON:0000042,1.79e-09,12;UBERON:0004732,6.71e-09,13;UBERON:0003076,8.86e-08,15;UBERON:0003057,8.86e-08,15 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.69145284915165,2.00146596706261,2.68176656656373,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,3.57051068422685,2.04000691244253,12.2247341376454,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85422955527427,0.847727604638247,0,0.92747276314595,0.257640540045629,1.30281799432113,0,0.584622030967192,0.252433774244115,0.552299391853796,0,0.355009592516614,1.10827308050404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0,0,0,0,7.87497397437753,11.0562729893588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.537101224341368,0.145016693914229,0.0852266274161009,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0.719489830333259,0,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0.726713517082227,0.642301571672949,1.69145284915165,2.00146596706261,2.68176656656373,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,3.57051068422685,2.04000691244253,12.2247341376454,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85422955527427,0.847727604638247,0,0.92747276314595,0.257640540045629,1.30281799432113,0,0.584622030967192,0.252433774244115,0.552299391853796,0,0.355009592516614,1.10827308050404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0,0,0,0,7.87497397437753,11.0562729893588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.537101224341368,0.145016693914229,0.0852266274161009,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0.719489830333259,0,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p@chr6:44621525..44621566,- | |short_description=p@chr6:44621525..44621566,- | ||
}} | }} |
Latest revision as of 02:00, 31 July 2015
Short description: | p@chr6:44621525..44621566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:44621525..44621566, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.64e-36 | 3 |
adipocyte of omentum tissue | 5.42e-36 | 3 |
oligodendrocyte | 4.77e-16 | 7 |
macroglial cell | 4.77e-16 | 7 |
astrocyte | 4.77e-16 | 7 |
oligodendrocyte precursor cell | 4.77e-16 | 7 |
fat cell | 1.12e-07 | 15 |
glial cell (sensu Vertebrata) | 6.42e-07 | 15 |
glial cell | 6.42e-07 | 15 |
glioblast | 6.42e-07 | 15 |
glioblast (sensu Vertebrata) | 6.42e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.29e-18 | 6 |
rhombic lip | 1.29e-18 | 6 |
omentum | 2.33e-18 | 6 |
peritoneum | 2.33e-18 | 6 |
abdominal cavity | 2.33e-18 | 6 |
visceral peritoneum | 2.33e-18 | 6 |
regional part of metencephalon | 1.29e-12 | 9 |
metencephalon | 1.29e-12 | 9 |
future metencephalon | 1.29e-12 | 9 |
segmental subdivision of hindbrain | 1.34e-09 | 12 |
hindbrain | 1.34e-09 | 12 |
presumptive hindbrain | 1.34e-09 | 12 |
cavity lining | 1.79e-09 | 12 |
serous membrane | 1.79e-09 | 12 |
segmental subdivision of nervous system | 6.71e-09 | 13 |
posterior neural tube | 8.86e-08 | 15 |
chordal neural plate | 8.86e-08 | 15 |