FFCP PHASE1:Hg19::chr16:67219381..67219395,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:67219381..67219395,-
|short_description=p@chr16:67219381..67219395,-
|description=CAGE_peak_at_chr16:67219381..67219395,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:67219381..67219395,- | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_at_chr16:67219381..67219395,- | |||
|id=chr16:67219381..67219395,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.22e-16;3!CL:0002553;2.78e-13;1!CL:0000333;3.12e-10;5!CL:0000123;4.17e-07;2!CL:0002554;4.17e-07;2!CL:0002598;4.17e-07;2!CL:0000242;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.61e-16,3;CL:0002553,2.95e-13,1;CL:0002598,3.70e-07,2;CL:0002554,4.42e-07,2;CL:0000242,5.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.92e-13;4!DOID:169;1.12e-08;6!DOID:3119;3.06e-08;14!DOID:1325;1.04e-07;7!DOID:3904;1.04e-07;7!DOID:1324;1.06e-07;15!DOID:0050615;3.01e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.07e-13,4;DOID:169,1.08e-08,6;DOID:3119,2.74e-08,14;DOID:1325,8.94e-08,7;DOID:3904,8.94e-08,7;DOID:1324,9.72e-08,15;DOID:0050615,2.76e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-16!115;UBERON:0005743!1.06e-13!86;UBERON:0000073!1.10e-13!94;UBERON:0001016!1.10e-13!94;UBERON:0001017!1.21e-13!82;UBERON:0001049!1.99e-12!57;UBERON:0005068!1.99e-12!57;UBERON:0006241!1.99e-12!57;UBERON:0007135!1.99e-12!57;UBERON:0003076!2.32e-12!15;UBERON:0003057!2.32e-12!15;UBERON:0003075!6.30e-10!86;UBERON:0007284!6.30e-10!86;UBERON:0002346!3.83e-09!90;UBERON:0000955!6.70e-09!69;UBERON:0006238!6.70e-09!69;UBERON:0002616!1.46e-08!59;UBERON:0004733!1.80e-08!12;UBERON:0002028!1.80e-08!12;UBERON:0007277!1.80e-08!12;UBERON:0004121!8.63e-08!169;UBERON:0004732!1.08e-07!13;UBERON:0000924!2.24e-07!173;UBERON:0006601!2.24e-07!173;UBERON:0002298!2.43e-07!8;UBERON:0002680!5.99e-07!9;UBERON:0001895!5.99e-07!9;UBERON:0010092!5.99e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.22e-16;3!UBERON:0000920;1.22e-16;3!UBERON:0000013;3.12e-10;5!UBERON:0002410;3.12e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.61e-16,3;UBERON:0000013,2.98e-10,5;UBERON:0002410,2.98e-10,5;UBERON:0003124,1.33e-07,7 | |||
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| ||
|short_description=p@chr16:67219381..67219395,- | |||
}} | }} |
Latest revision as of 10:05, 17 September 2015
Short description: | p@chr16:67219381..67219395, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:67219381..67219395, - |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.61e-16 | 3 |
lung fibroblast | 2.95e-13 | 1 |
bronchial smooth muscle cell | 3.70e-07 | 2 |
fibroblast of lymphatic vessel | 4.42e-07 | 2 |
Merkel cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.61e-16 | 3 |
sympathetic nervous system | 2.98e-10 | 5 |
autonomic nervous system | 2.98e-10 | 5 |
chorion | 1.33e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.07e-13 | 4 |
neuroendocrine tumor | 1.08e-08 | 6 |
gastrointestinal system cancer | 2.74e-08 | 14 |
bronchus cancer | 8.94e-08 | 7 |
bronchogenic carcinoma | 8.94e-08 | 7 |
lung cancer | 9.72e-08 | 15 |
respiratory system cancer | 2.76e-07 | 16 |