FFCP PHASE1:Hg19::chr7:27170324..27170335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3201 | |EntrezGene=3201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5105 | |HGNC=5105 | ||
|TSSclassifier=strong | |||
|UniProt=Q00056 | |UniProt=Q00056 | ||
|association_with_transcript=16bp_to_AB463747,BC160036,M74297_5end | |association_with_transcript=16bp_to_AB463747,BC160036,M74297_5end | ||
|cluster_id=chr7:27170324..27170335,- | |||
|coexpression_cluster_id=C4679 | |||
|description=CAGE_peak_7_at_HOXA4_5end | |description=CAGE_peak_7_at_HOXA4_5end | ||
|id=chr7:27170324..27170335,- | |id=chr7:27170324..27170335,- | ||
|ontology_enrichment_celltype=CL:1000507!1.61e-09!12;CL:1000494!1.61e-09!12;CL:1000497!4.40e-09!18;CL:0002518!4.40e-09!18;CL:1000449!2.06e-08!16 | |ontology_enrichment_celltype=CL:1000507!1.61e-09!12;CL:1000494!1.61e-09!12;CL:1000497!4.40e-09!18;CL:0002518!4.40e-09!18;CL:1000449!2.06e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0002595;4.55e-11;5!CL:0000650;1.64e-07;2!CL:1000500;1.64e-07;2!CL:1000618;1.64e-07;2!CL:1001318;1.64e-07;2!CL:0002173;1.64e-07;2!CL:0002593;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,4.55e-11,5;CL:0002593,1.64e-07,2;CL:0000650,2.40e-07,2;CL:1000500,2.40e-07,2;CL:1000618,2.40e-07,2;CL:1001318,2.40e-07,2;CL:0002173,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.64e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;9.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009569!5.63e-13!113;UBERON:0000489!3.25e-11!32;UBERON:0000464!4.75e-11!104;UBERON:0002113!1.44e-10!27;UBERON:0003918!1.44e-10!27;UBERON:0005095!1.44e-10!27;UBERON:0007687!1.44e-10!27;UBERON:0002417!1.88e-10!61;UBERON:0000916!1.88e-10!61;UBERON:0005177!2.57e-10!107;UBERON:0003887!3.72e-10!21;UBERON:0000466!1.56e-09!126;UBERON:0009773!1.61e-09!12;UBERON:0001231!1.61e-09!12;UBERON:0004810!1.61e-09!12;UBERON:0006555!1.63e-09!17;UBERON:0005103!1.63e-09!17;UBERON:0000083!1.63e-09!17;UBERON:0009201!1.63e-09!17;UBERON:0004819!1.63e-09!17;UBERON:0006553!1.63e-09!17;UBERON:0003074!1.63e-09!17;UBERON:0003060!1.63e-09!17;UBERON:0003886!4.34e-09!63;UBERON:0000080!7.44e-09!18;UBERON:0002120!7.44e-09!18;UBERON:0004875!7.44e-09!18;UBERON:0005721!7.44e-09!18;UBERON:0005754!7.44e-09!18;UBERON:0007297!7.44e-09!18;UBERON:0005172!8.26e-09!55;UBERON:0005173!8.26e-09!55;UBERON:0004211!2.06e-08!16;UBERON:0001285!2.06e-08!16;UBERON:0007684!2.06e-08!16;UBERON:0003220!2.06e-08!16;UBERON:0004208!2.06e-08!16;UBERON:0000058!4.76e-08!26;UBERON:0006554!7.65e-08!44;UBERON:0004876!9.66e-08!20;UBERON:0002553!1.31e-07!70;UBERON:0001008!1.41e-07!45;UBERON:0003914!2.17e-07!118;UBERON:0003103!3.59e-07!69 | |ontology_enrichment_uberon=UBERON:0009569!5.63e-13!113;UBERON:0000489!3.25e-11!32;UBERON:0000464!4.75e-11!104;UBERON:0002113!1.44e-10!27;UBERON:0003918!1.44e-10!27;UBERON:0005095!1.44e-10!27;UBERON:0007687!1.44e-10!27;UBERON:0002417!1.88e-10!61;UBERON:0000916!1.88e-10!61;UBERON:0005177!2.57e-10!107;UBERON:0003887!3.72e-10!21;UBERON:0000466!1.56e-09!126;UBERON:0009773!1.61e-09!12;UBERON:0001231!1.61e-09!12;UBERON:0004810!1.61e-09!12;UBERON:0006555!1.63e-09!17;UBERON:0005103!1.63e-09!17;UBERON:0000083!1.63e-09!17;UBERON:0009201!1.63e-09!17;UBERON:0004819!1.63e-09!17;UBERON:0006553!1.63e-09!17;UBERON:0003074!1.63e-09!17;UBERON:0003060!1.63e-09!17;UBERON:0003886!4.34e-09!63;UBERON:0000080!7.44e-09!18;UBERON:0002120!7.44e-09!18;UBERON:0004875!7.44e-09!18;UBERON:0005721!7.44e-09!18;UBERON:0005754!7.44e-09!18;UBERON:0007297!7.44e-09!18;UBERON:0005172!8.26e-09!55;UBERON:0005173!8.26e-09!55;UBERON:0004211!2.06e-08!16;UBERON:0001285!2.06e-08!16;UBERON:0007684!2.06e-08!16;UBERON:0003220!2.06e-08!16;UBERON:0004208!2.06e-08!16;UBERON:0000058!4.76e-08!26;UBERON:0006554!7.65e-08!44;UBERON:0004876!9.66e-08!20;UBERON:0002553!1.31e-07!70;UBERON:0001008!1.41e-07!45;UBERON:0003914!2.17e-07!118;UBERON:0003103!3.59e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;9.72e-14;1!UBERON:0006518;9.72e-14;1!UBERON:0008949;9.72e-14;1!UBERON:0000101;9.72e-14;1!UBERON:0002167;9.72e-14;1!UBERON:0003834;4.55e-11;5!UBERON:0001533;4.55e-11;5!UBERON:0003513;3.70e-08;7!UBERON:0003567;1.64e-07;2!UBERON:0003838;1.64e-07;2!UBERON:0003586;1.64e-07;2!UBERON:0005169;1.64e-07;2!UBERON:0002321;1.64e-07;2!UBERON:0002456;1.64e-07;2!UBERON:0005215;1.64e-07;2!UBERON:0002303;1.64e-07;2!UBERON:0002319;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,7.55e-14,1;UBERON:0006518,7.55e-14,1;UBERON:0008949,7.55e-14,1;UBERON:0000101,7.55e-14,1;UBERON:0002167,7.55e-14,1;UBERON:0003834,4.55e-11,5;UBERON:0001533,4.55e-11,5;UBERON:0003513,3.70e-08,7;UBERON:0002456,1.64e-07,2;UBERON:0003567,2.40e-07,2;UBERON:0003838,2.40e-07,2;UBERON:0003586,2.40e-07,2;UBERON:0005169,2.40e-07,2;UBERON:0002321,2.40e-07,2;UBERON:0005215,2.40e-07,2;UBERON:0002303,2.40e-07,2;UBERON:0002319,2.40e-07,2 | |||
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| ||
|short_description=p7@HOXA4 | |short_description=p7@HOXA4 | ||
}} | }} |
Latest revision as of 01:21, 18 September 2015
Short description: | p7@HOXA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HOXA4_5end |
Coexpression cluster: | C4679_clear_Smooth_Mesothelial_Alveolar_Renal_gastric_mesothelioma |
Association with transcript: | 16bp_to_AB463747, BC160036, M74297_5end |
EntrezGene: | HOXA4 |
HGNC: | 5105 |
UniProt: | Q00056 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 4.55e-11 | 5 |
smooth muscle cell of the internal thoracic artery | 1.64e-07 | 2 |
mesangial cell | 2.40e-07 | 2 |
kidney interstitial cell | 2.40e-07 | 2 |
juxtaglomerular complex cell | 2.40e-07 | 2 |
renal interstitial pericyte | 2.40e-07 | 2 |
extraglomerular mesangial cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 7.55e-14 | 1 |
right lung lobe | 7.55e-14 | 1 |
lower lobe of lung | 7.55e-14 | 1 |
lobe of lung | 7.55e-14 | 1 |
right lung | 7.55e-14 | 1 |
thoracic segment blood vessel | 4.55e-11 | 5 |
subclavian artery | 4.55e-11 | 5 |
trunk blood vessel | 3.70e-08 | 7 |
internal thoracic artery | 1.64e-07 | 2 |
abdomen connective tissue | 2.40e-07 | 2 |
abdominal segment connective tissue | 2.40e-07 | 2 |
trunk connective tissue | 2.40e-07 | 2 |
interstitial tissue | 2.40e-07 | 2 |
extraglomerular mesangium | 2.40e-07 | 2 |
kidney interstitium | 2.40e-07 | 2 |
juxtaglomerular apparatus | 2.40e-07 | 2 |
mesangium | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.87e-08 | 2 |