FFCP PHASE1:Hg19::chr7:3386482..3386485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:3386482..3386485,+ | |||
|description=CAGE_peak_at_chr7:3386482..3386485,+ | |description=CAGE_peak_at_chr7:3386482..3386485,+ | ||
|id=chr7:3386482..3386485,+ | |id=chr7:3386482..3386485,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.76e-11;3!CL:0000128;1.67e-08;7!CL:0000126;1.67e-08;7!CL:0000127;1.67e-08;7!CL:0000333;4.75e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.19e-11,3;CL:0000128,1.95e-08,7;CL:0000126,1.95e-08,7;CL:0000127,1.95e-08,7;CL:0002453,1.95e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.79e-08;2 | |||
|ontology_enrichment_disease=DOID:3095!3.07e-10!22;DOID:2994!3.07e-10!22;DOID:171!1.70e-07!10 | |ontology_enrichment_disease=DOID:3095!3.07e-10!22;DOID:2994!3.07e-10!22;DOID:171!1.70e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;1.35e-17;10!DOID:3095;1.64e-09;22!DOID:2994;1.64e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.05e-17,10;DOID:3095,1.43e-09,22;DOID:2994,1.43e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.90e-16!115;UBERON:0000073!1.50e-11!94;UBERON:0001016!1.50e-11!94;UBERON:0001017!6.90e-11!82;UBERON:0005743!2.70e-10!86;UBERON:0002346!3.74e-09!90;UBERON:0001049!1.09e-08!57;UBERON:0005068!1.09e-08!57;UBERON:0006241!1.09e-08!57;UBERON:0007135!1.09e-08!57;UBERON:0000955!2.05e-08!69;UBERON:0006238!2.05e-08!69;UBERON:0000160!4.70e-08!27;UBERON:0000924!5.02e-08!173;UBERON:0006601!5.02e-08!173;UBERON:0002780!7.72e-08!41;UBERON:0001890!7.72e-08!41;UBERON:0006240!7.72e-08!41;UBERON:0003080!1.79e-07!42;UBERON:0005409!3.54e-07!35;UBERON:0003075!3.76e-07!86;UBERON:0007284!3.76e-07!86;UBERON:0000956!8.83e-07!25;UBERON:0000203!8.83e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!5.90e-16!115;UBERON:0000073!1.50e-11!94;UBERON:0001016!1.50e-11!94;UBERON:0001017!6.90e-11!82;UBERON:0005743!2.70e-10!86;UBERON:0002346!3.74e-09!90;UBERON:0001049!1.09e-08!57;UBERON:0005068!1.09e-08!57;UBERON:0006241!1.09e-08!57;UBERON:0007135!1.09e-08!57;UBERON:0000955!2.05e-08!69;UBERON:0006238!2.05e-08!69;UBERON:0000160!4.70e-08!27;UBERON:0000924!5.02e-08!173;UBERON:0006601!5.02e-08!173;UBERON:0002780!7.72e-08!41;UBERON:0001890!7.72e-08!41;UBERON:0006240!7.72e-08!41;UBERON:0003080!1.79e-07!42;UBERON:0005409!3.54e-07!35;UBERON:0003075!3.76e-07!86;UBERON:0007284!3.76e-07!86;UBERON:0000956!8.83e-07!25;UBERON:0000203!8.83e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002050;3.22e-19;5!UBERON:0005423;3.22e-19;5!UBERON:0002346;7.30e-16;4!UBERON:0000923;7.30e-16;4!UBERON:0010316;7.30e-16;4!UBERON:0005291;7.30e-16;4!UBERON:0000922;5.19e-14;49!UBERON:0006947;2.51e-11;3!UBERON:0004054;2.51e-11;3!UBERON:0005904;1.33e-08;4!UBERON:0003714;1.93e-08;2!UBERON:0000013;4.75e-07;5!UBERON:0002410;4.75e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.12e-11,3;UBERON:0004054,5.12e-11,3;UBERON:0003714,1.74e-08,2;UBERON:0005904,2.25e-08,4;UBERON:0000013,4.20e-07,5;UBERON:0002410,4.20e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,2.28988789704845,1.36874425072884,2.25976751270645,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.614843499851882,0.327447688744282,0,0,0.649094787309367,0.870648686496336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0.204154171254893,0.737005903870608,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.265059536642971,0,0.207322110030741,0.504641701751257,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,1.22896305723383,0.223676107892416,0.500547425135725,0,0,0,0,0,0,0,0.586032717087576,0,0,3.97790605528978,0,0,0,0,0.140669416410513,0,0,0.422250816255987,2.98871982376605,0.828851746593443,3.52705846995986,2.35217969754956,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,3.99227596002388,0.260427761085233,0,0,0,0,0,1.37897349296586,2.33283690706603,0,0,0,0,0,0,0,0,0.278847488557207,0.692552326534174,0,0.922255617552241,0.448788222048861,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,1.29833183845255,0,0.265372693510018,2.4441205797345,0.889563386041866,0.617819694732514,0.208843899010911,0.134802265961354,0.802577647298789,0.234264445725339,0,0.391329237864179,0,1.18375320854817,7.25944296291983,0.91821828489147,0.189559738885464,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.569797163602908,0.195551382734803,0,0.426905989478705,0,0,0,0.514784993585894,0,0.124252535565433,0,0,0.523014231561666,0.407992870545287,0,0,0.273810757783986,0,0.429765441419957,0.262887354279314,0,0.916641696046735,2.87149209830726,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.393915911536118,0.329663433524666,0.471824806979294,0,0,0.795229689809303,0.272406812223151,0.964518890790115,0.412618309791701,0.83088067605837,0,0,0.121499113316049,0,0.551639951094387,0.0524545881349981,0,0,1.34340638123612,0,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.320362237703084,1.10043013569766,1.24271716604159,0.496166021811951,0,1.94868157409433,0,1.08803560673895,0.5013797880454,0.306345576763462,0,3.92635240625586,0,0.244052529803926,0.1251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0.553394539744923,0.624902039810533,0,0,0.235265819698172,0,1.30428925749743,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0.829412415681711,0,0,0.150257608997218,0.380805212168795,0,0.545545977607678,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0.97894681802587,0.179088841081487,0,0,0.176689145945881,0,0,0.512483037175893,0,0,0.276516872303462,0,0.265729680626726,0,0.327609848846413,0,0,0,0,0,0,0,0,0,1.79052119825112,0,2.20172318598255,0.109209638192014,3.3946505990805,8.715571724169,3.84200869202907,2.79322458986622,0,0.70975570501128,0,0,0.3062454773532,0.128458450192919,0,0.478901577171454,0,1.76450187355203,0.0691572524642179,0.161475645631851,2.85538840518309,0,0.471878893390961,0,0,0,0,0,0.300841313397029,0.20170506870352,0.781514011233092,1.57144016688853,0.327543835020193,0,0.135075169236789,0,0.206686796501184,0,0,0,1.48863353516788,2.98981115411355,0,0,0.336283722218824,0,0.91064876540519,0.354809480650555,0.115233987555779,0,0.203909198930495,0.131545547125698,0,0,0.235479278551542,0.157115589916002,0,3.65263488203798,0,0.47775168788705,0.214429632529969,0.316027223465453,0,0.869291361512897,0.8017113647302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| ||
|short_description=p@chr7:3386482..3386485,+ | |short_description=p@chr7:3386482..3386485,+ | ||
}} | }} |
Latest revision as of 09:33, 31 July 2015
Short description: | p@chr7:3386482..3386485, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:3386482..3386485, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.19e-11 | 3 |
oligodendrocyte | 1.95e-08 | 7 |
macroglial cell | 1.95e-08 | 7 |
astrocyte | 1.95e-08 | 7 |
oligodendrocyte precursor cell | 1.95e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.12e-11 | 3 |
internal male genitalia | 5.12e-11 | 3 |
neural tissue | 1.74e-08 | 2 |
duct of male reproductive system | 2.25e-08 | 4 |
sympathetic nervous system | 4.20e-07 | 5 |
autonomic nervous system | 4.20e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.05e-17 | 10 |
germ cell and embryonal cancer | 1.43e-09 | 22 |
germ cell cancer | 1.43e-09 | 22 |